Thhalv10025268m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10025268m.g T009985_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.724 0.975
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.694 0.886
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.692 0.911
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.690 0.848
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10025268m AP2 135 164
Thhalv10025268m AP2 217 268

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28752.m000339 Ricinus communis 28752.m000339 I 0.715
29169.m000017 Ricinus communis 29169.m000017 I 0.712
29805.m001494 Ricinus communis 29805.m001494 I 0.721
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.715
AP2 Arabidopsis thaliana AT4G36920 I 0.724
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.724
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.702
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.705
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.715
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.697
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.714
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.715
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.713
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.689
Bo1g004960 Brassica oleracea Bo1g004960 I 0.724
Bo4g070350 Brassica oleracea Bo4g070350 I 0.691
Bo7g118400 Brassica oleracea Bo7g118400 I 0.724
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.724
Bra011741 Brassica rapa Bra011741 I 0.724
Bra011939 Brassica rapa Bra011939 I 0.691
Bra017809 Brassica rapa Bra017809 I 0.724
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.682
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.687
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.713
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.714
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.692
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.724
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.724
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.692
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.712
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.715
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.712
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.715
Ca_02499 Cicer arietinum Ca_02499 I 0.715
Ca_09295 Cicer arietinum Ca_09295 I 0.724
Ca_12010 Cicer arietinum Ca_12010 I 0.695
Ca_14618 Cicer arietinum Ca_14618 I 0.703
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.709
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.715
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.686
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.710
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.684
Cla000716 Citrullus lanatus Cla000716 I 0.723
Cla018124 Citrullus lanatus Cla018124 I 0.708
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.715
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.723
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.708
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.720
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.683
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.706
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.715
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.699
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.723
F775_32962 Aegilops tauschii F775_32962 I 0.713
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.683
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.706
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.723
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.712
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.723
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.715
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.715
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.715
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.715
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.723
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.712
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.714
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.723
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.713
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.720
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.720
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.715
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.712
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.690
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.714
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.687
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.710
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.687
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.714
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.715
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.724
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.723
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.723
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.716
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.698
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.693
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.681
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.696
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.692
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.698
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.718
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.702
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.714
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.695
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.694
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.722
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.708
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.712
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.710
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.685
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.713
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.681
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.683
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.713
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.706
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.706
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.706
MDP0000137561 Malus domestica MDP0000137561 I 0.707
MDP0000163645 Malus domestica MDP0000163645 I 0.696
MDP0000181606 Malus domestica MDP0000181606 I 0.710
MDP0000200319 Malus domestica MDP0000200319 I 0.714
mgf005133m Mimulus guttatus mgf005133m I 0.693
mgf009315m Mimulus guttatus mgf009315m I 0.722
mgf010466m Mimulus guttatus mgf010466m I 0.693
mgf021945m Mimulus guttatus mgf021945m I 0.712
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.681
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.690
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.712
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.690
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.724
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.723
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.695
OB03G45870 Oryza brachyantha OB03G45870 I 0.697
OB06G29960 Oryza brachyantha OB06G29960 I 0.713
OBART07G08110 Oryza barthii OBART07G08110 I 0.689
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.697
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.714
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.713
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.689
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.693
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.697
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.714
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.713
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.689
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.689
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.697
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.714
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.713
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.697
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.714
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.715
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.712
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.689
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.686
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.715
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.684
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.714
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.715
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.689
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.697
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.714
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.713
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.689
OS05G0121600 Oryza sativa OS05G0121600 I 0.715
OS07G0235800 Oryza sativa OS07G0235800 I 0.689
P93632_MAIZE Zea mays P93632_MAIZE D 0.690
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.687
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.683
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.715
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.715
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.687
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.691
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.687
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.715
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.723
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.723
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.695
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.715
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.710
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.714
PK02403.1 Cannabis sativa PK02403.1 I 0.723
PK07183.1 Cannabis sativa PK07183.1 I 0.714
Pm000974 Prunus mume Pm000974 I 0.710
Pm002492 Prunus mume Pm002492 I 0.714
Pm030172 Prunus mume Pm030172 I 0.706
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.715
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.711
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.723
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.705
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.714
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.706
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.714
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.694
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.724
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.692
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.715
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.712
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.711
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.714
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.723
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.702
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.687
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.687
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.714
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.690
Si012635m.g Setaria italica Si012635m.g I 0.714
Si025305m.g Setaria italica Si025305m.g I 0.715
Si029636m.g Setaria italica Si029636m.g I 0.687
Si036068m.g Setaria italica Si036068m.g I 0.687
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.717
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.723
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.724
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.698
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.712
TCM_000665 Theobroma cacao TCM_000665 I 0.720
TCM_022077 Theobroma cacao TCM_022077 I 0.714
TCM_042000 Theobroma cacao TCM_042000 I 0.713
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.684
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.692
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.723
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.713
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.713
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.713
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.714
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.692