CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O7_04628
(
Cladophialophora yegresii
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
A1O7_04628
T014077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01238
M01669_2.00
Neurospora crassa
NYATNNNN
NNNNATRN
PBM
Weirauch et al.(2014)
pTH8942
0.653
0.770
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ60475
ARID/BRIGHT
149
236
TNLNYLDQLAKFHKQYGAHLNRFPSVDKRPLDLYKLKKAVEVRGGFERVCKDKKWAEIGRDLGYSGKIMSSLSTSLKNSYQRWLHPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Cladophialophora yegresii
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27751.m000169
Ricinus communis
27751.m000169
N
0.000
BHLH039
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001751
N
0.000
Bo4g112570
Brassica oleracea
Bo4g112570
N
0.000
Bo4g112590
Brassica oleracea
Bo4g112590
N
0.000
Bo6g072500
Brassica oleracea
Bo6g072500
N
0.000
Bo6g072510
Brassica oleracea
Bo6g072510
N
0.000
Bo7g039170
Brassica oleracea
Bo7g039170
N
0.000
Bostr.20505s0055
Boechera stricta
Bostr.20505s0055
N
0.000
Bostr.20505s0056
Boechera stricta
Bostr.20505s0056
N
0.000
Bra003260
Brassica rapa
Bra003260
N
0.000
Bra003261
Brassica rapa
Bra003261
N
0.000
Bra014654
Brassica rapa
Bra014654
N
0.000
Bra014657
Brassica rapa
Bra014657
N
0.000
Bra014658
Brassica rapa
Bra014658
N
0.000
Bra014971
Brassica rapa
Bra014971
N
0.000
Cagra.0578s0027
Capsella grandiflora
Cagra.0578s0027
N
0.000
Cagra.0578s0028
Capsella grandiflora
Cagra.0578s0028
N
0.000
Carubv10017770m.g
Capsella rubella
Carubv10017770m.g
N
0.000
Carubv10019130m.g
Capsella rubella
Carubv10019130m.g
N
0.000
Cucsa.371810
Cucumis sativus
Cucsa.371810
N
0.000
MDP0000641681
Malus domestica
MDP0000641681
N
0.000
ORG2
Arabidopsis thaliana
AT3G56970
N
0.000
ORG3
Arabidopsis thaliana
AT3G56980
N
0.000
Pm028948
Prunus mume
Pm028948
N
0.000
Pm028949
Prunus mume
Pm028949
N
0.000
Pm031098
Prunus mume
Pm031098
N
0.000
Pm031103
Prunus mume
Pm031103
N
0.000
POPTR_0006s03560
Populus trichocarpa
POPTR_0006s03560
N
0.000
POPTR_0006s03590
Populus trichocarpa
POPTR_0006s03590
N
0.000
POPTR_0016s03680
Populus trichocarpa
POPTR_0016s03680
N
0.000
PRUPE_ppa018670mg
Prunus persica
PRUPE_ppa018670mg
N
0.000
PRUPE_ppa024966mg
Prunus persica
PRUPE_ppa024966mg
N
0.000
SapurV1A.0159s0010
Salix purpurea
SapurV1A.0159s0010
N
0.000
SapurV1A.0196s0420
Salix purpurea
SapurV1A.0196s0420
N
0.000
SapurV1A.0196s0430
Salix purpurea
SapurV1A.0196s0430
N
0.000
Thhalv10006189m.g
Eutrema salsugineum
Thhalv10006189m.g
N
0.000
Thhalv10006191m.g
Eutrema salsugineum
Thhalv10006191m.g
N
0.000
VIT_08s0007g05300
Vitis vinifera
VIT_08s0007g05300
N
0.000