ARID3C (Canis familiaris)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSCAFG00000024873 T014460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.692 0.860
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.692 0.860
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.692 0.860
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.692 0.860
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.692 0.860
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.692 0.849
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.663 0.802
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.654 0.709
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.654 0.791
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.654 0.791
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.654 0.791
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.654 0.791
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.631 0.651
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.628 0.453
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.461 0.372
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.461 0.314
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000026469 ARID/BRIGHT 114 200

Links

Other ARID/BRIGHT family TFs
Other Canis familiaris TFs

369 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29589.m001281 Ricinus communis 29589.m001281 N 0.000
30054.m000824 Ricinus communis 30054.m000824 N 0.000
30078.m002228 Ricinus communis 30078.m002228 N 0.000
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.000
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.000
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.000
Aquca_019_00150 Aquilegia coerulea Aquca_019_00150 N 0.000
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.000
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.000
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.000
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.000
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.000
BGIOSGA031347 Oryza indica BGIOSGA031347 N 0.000
Bo6g120700 Brassica oleracea Bo6g120700 N 0.000
Bo8g070540 Brassica oleracea Bo8g070540 N 0.000
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.000
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.000
Bra015731 Brassica rapa Bra015731 N 0.000
Bra016441 Brassica rapa Bra016441 N 0.000
Bra034379 Brassica rapa Bra034379 N 0.000
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.000
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.000
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.000
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.000
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.000
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.000
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.000
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.000
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.000
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.000
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.000
Ca_00735 Cicer arietinum Ca_00735 N 0.000
Ca_11505 Cicer arietinum Ca_11505 N 0.000
Ca_12361 Cicer arietinum Ca_12361 N 0.000
Ca_17446 Cicer arietinum Ca_17446 N 0.000
Ca_19047 Cicer arietinum Ca_19047 N 0.000
chr3.CM0396.500.nd Lotus japonicus chr3.CM0396.500.nd N 0.000
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.000
Ciclev10012756m.g Citrus clementina Ciclev10012756m.g N 0.000
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.000
Cla001071 Citrullus lanatus Cla001071 N 0.000
Cla008966 Citrullus lanatus Cla008966 N 0.000
Cla016461 Citrullus lanatus Cla016461 N 0.000
Cla018029 Citrullus lanatus Cla018029 N 0.000
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.000
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.000
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.000
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.000
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.000
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.000
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.000
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.000
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.000
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.000
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.000
e_gw1.1.253.1 Physcomitrella patens e_gw1.1.253.1 N 0.000
F775_22386 Aegilops tauschii F775_22386 N 0.000
F775_28196 Aegilops tauschii F775_28196 N 0.000
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.000
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.000
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.000
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.000
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.000
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.000
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.000
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.000
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.000
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.000
GLYMA12G08810 Glycine max GLYMA12G08810 N 0.000
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.000
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.000
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.000
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.000
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.000
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.000
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.000
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.000
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.000
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.000
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.000
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.000
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.000
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.000
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.000
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.000
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.000
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.000
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.000
LjSGA_025747.1.1 Lotus japonicus LjSGA_025747.1.1 N 0.000
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.000
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.000
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.000
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.000
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.000
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.000
Lus10014396.g Linum usitatissimum Lus10014396.g N 0.000
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.000
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.000
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.000
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.000
MDP0000133007 Malus domestica MDP0000133007 N 0.000
MDP0000133008 Malus domestica MDP0000133008 N 0.000
MDP0000225862 Malus domestica MDP0000225862 N 0.000
MDP0000316069 Malus domestica MDP0000316069 N 0.000
MDP0000553473 Malus domestica MDP0000553473 N 0.000
MDP0000570901 Malus domestica MDP0000570901 N 0.000
mgf006916m Mimulus guttatus mgf006916m N 0.000
mgf013167m Mimulus guttatus mgf013167m N 0.000
mgf023930m Mimulus guttatus mgf023930m N 0.000
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.000
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.000
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.000
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.000
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.000
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.000
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.000
OB02G35810 Oryza brachyantha OB02G35810 N 0.000
OB04G30420 Oryza brachyantha OB04G30420 N 0.000
OB08G30470 Oryza brachyantha OB08G30470 N 0.000
OBART02G28660 Oryza barthii OBART02G28660 N 0.000
OBART04G23520 Oryza barthii OBART04G23520 N 0.000
OBART08G23610 Oryza barthii OBART08G23610 N 0.000
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.000
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.000
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.000
OGLUM10G19490 Oryza glumaepatula OGLUM10G19490 N 0.000
OLONG_011823 Oryza longistaminata OLONG_011823 N 0.000
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.000
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.000
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.000
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.000
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.000
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.000
ONIVA10G22010 Oryza nivara ONIVA10G22010 N 0.000
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.000
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.000
OPUNC08G21610 Oryza punctata OPUNC08G21610 N 0.000
OPUNC10G17840 Oryza punctata OPUNC10G17840 N 0.000
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.000
orange1.1g028382m.g Citrus sinensis orange1.1g028382m.g N 0.000
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.000
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.000
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.000
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.000
ORGLA10G0145900 Oryza glaberrima ORGLA10G0145900 N 0.000
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.000
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.000
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.000
ORUFI10G20640 Oryza rufipogon ORUFI10G20640 N 0.000
OS02G0692700 Oryza sativa OS02G0692700 N 0.000
OS04G0591100 Oryza sativa OS04G0591100 N 0.000
OS08G0560300 Oryza sativa OS08G0560300 N 0.000
OS10G0574700 Oryza sativa OS10G0574700 N 0.000
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.000
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.000
Pavir.Eb02108 Panicum virgatum Pavir.Eb02108 N 0.000
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.000
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.000
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.000
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.000
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.000
PK10752.1 Cannabis sativa PK10752.1 N 0.000
PK20928.1 Cannabis sativa PK20928.1 N 0.000
PK29286.1 Cannabis sativa PK29286.1 N 0.000
Pm001175 Prunus mume Pm001175 N 0.000
Pm012470 Prunus mume Pm012470 N 0.000
Pm022874 Prunus mume Pm022874 N 0.000
Pm026291 Prunus mume Pm026291 N 0.000
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.000
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.000
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.000
POPTR_0006s12100 Populus trichocarpa POPTR_0006s12100 N 0.000
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.000
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.000
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.000
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.000
PRUPE_ppa011630mg Prunus persica PRUPE_ppa011630mg N 0.000
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.000
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.000
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.000
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.000
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.000
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.000
SapurV1A.3839s0010 Salix purpurea SapurV1A.3839s0010 N 0.000
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.000
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.000
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.000
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.000
Si010911m.g Setaria italica Si010911m.g N 0.000
Si017318m.g Setaria italica Si017318m.g N 0.000
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.000
TCM_015701 Theobroma cacao TCM_015701 N 0.000
TCM_022356 Theobroma cacao TCM_022356 N 0.000
TCM_041560 Theobroma cacao TCM_041560 N 0.000
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.000
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.000
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N 0.000
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.000
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.000
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.000
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.000
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.000
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.000
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.000
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.000
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.000
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.000