ENSXMAG00000016801 (Xiphophorus maculatus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSXMAG00000016801 T014835_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.741 0.930
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.739 0.953
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.739 0.953
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.739 0.953
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.739 0.953
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.739 0.953
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.739 0.942
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.701 0.779
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.687 0.826
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.687 0.826
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.687 0.826
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.687 0.826
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.675 0.488
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.664 0.686
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.508 0.407
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000016833 ARID/BRIGHT 257 343

Links

Other ARID/BRIGHT family TFs
Other Xiphophorus maculatus TFs

366 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N 0.000
AALB000200 Anopheles albimanus AALB000200 I 0.000
AARA003793 Anopheles arabiensis AARA003793 I 0.000
ACHR008323 Anopheles christyi ACHR008323 I 0.000
ACOM029390 Anopheles coluzzii ACOM029390 I 0.000
ACUA027275 Anopheles culicifacies ACUA027275 I 0.000
ACYPI21611 Acyrthosiphon pisum ACYPI21611 N 0.000
ADIR009414 Anopheles dirus ADIR009414 I 0.000
AEPI007123 Anopheles epiroticus AEPI007123 I 0.000
AFAF019729 Anopheles farauti AFAF019729 I 0.000
AFUN010726 Anopheles funestus AFUN010726 I 0.000
AGAP009983 Anopheles gambiae AGAP009983 I 0.000
AMAM007264 Anopheles maculatus AMAM007264 I 0.000
AMEC011376 Anopheles melas AMEC011376 I 0.000
AMEM008272 Anopheles merus AMEM008272 I 0.000
AMIN006744 Anopheles minimus AMIN006744 I 0.000
AQUA009094 Anopheles quadriannulatus AQUA009094 I 0.000
ASIS002214 Anopheles sinensis ASIS002214 I 0.000
ASTEI03995 Anopheles stephensi ASTEI03995 I 0.000
GA11011 Drosophila pseudoobscura FBgn0071067 I 0.000
GD22993 Drosophila simulans FBgn0194385 I 0.000
GE16494 Drosophila yakuba FBgn0234011 I 0.000
GF14859 Drosophila ananassae FBgn0091886 I 0.000
GG24687 Drosophila erecta FBgn0116818 I 0.000
GH10058 Drosophila grimshawi FBgn0117539 I 0.000
GI16429 Drosophila mojavensis FBgn0139177 I 0.000
GJ16214 Drosophila virilis FBgn0203399 I 0.000
GK21091 Drosophila willistoni FBgn0223083 I 0.000
GL13900 Drosophila persimilis FBgn0151505 I 0.000
GM16704 Drosophila sechellia FBgn0171617 I 0.000
HMEL016722 Heliconius melpomene HMEL016722 N 0.000
KGM_16315 Danaus plexippus KGM_16315 N 0.000
LDEC018964 Leptinotarsa decemlineata LDEC018964 N 0.000
MCINX005941 Melitaea cinxia MCINX005941 N 0.000
MDOA010091 Musca domestica MDOA010091 I 0.000
net Drosophila melanogaster FBgn0002931 D 0.000
PPAI008042 Phlebotomus papatasi PPAI008042 N 0.000
TC005579 Tribolium castaneum TC005579 N 0.000
YQE_06569 Dendroctonus ponderosae YQE_06569 N 0.000