Cla007529 (Citrullus lanatus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Cla007529 T015875_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.527 0.410
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.515 0.470
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.497 0.434
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.470 0.386
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.470 0.386
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.470 0.386
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.470 0.386
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.470 0.386
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.470 0.386
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.470 0.373
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.470 0.325
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.462 0.361
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.462 0.361
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.462 0.361
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.462 0.361
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.462 0.361
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla007529 ARID/BRIGHT 33 116

Links

Other ARID/BRIGHT family TFs
Other Citrullus lanatus TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007136 Calypte anna Aan_R007136 I 0.000
Afo_R002865 Aptenodytes forsteri Afo_R002865 I 0.000
Alligator_sinensis_CCG009966.1 Alligator sinensis Alligator_sinensis_CCG009966.1 I 0.000
Brh_R001567 Buceros rhinoceros Brh_R001567 I 0.000
Cmyd_10017008 Chelonia mydas Cmyd_10017008 I 0.000
ENSAMEG00000004665 Ailuropoda melanoleuca ENSAMEG00000004665 I 0.000
ENSAPLG00000015301 Anas platyrhynchos ENSAPLG00000015301 I 0.000
ENSBTAP00000032681-D1 Bos grunniens ENSBTAP00000032681-D1 I 0.000
ENSCPOG00000021914 Cavia porcellus ENSCPOG00000021914 I 0.000
ENSCSAG00000004558 Chlorocebus sabaeus ENSCSAG00000004558 I 0.000
ENSDORG00000011805 Dipodomys ordii ENSDORG00000011805 I 0.000
ENSETEG00000002138 Echinops telfairi ENSETEG00000002138 I 0.000
ENSETEG00000004201 Echinops telfairi ENSETEG00000004201 I 0.000
ENSETEG00000017021 Echinops telfairi ENSETEG00000017021 I 0.000
ENSFALG00000004728 Ficedula albicollis ENSFALG00000004728 I 0.000
ENSGALG00000026700 Gallus gallus ENSGALG00000026700 I 0.000
ENSLACG00000006175 Latimeria chalumnae ENSLACG00000006175 I 0.000
ENSLOCG00000008225 Lepisosteus oculatus ENSLOCG00000008225 I 0.000
ENSMICG00000000457 Microcebus murinus ENSMICG00000000457 I 0.000
ENSMODG00000007802 Monodelphis domestica ENSMODG00000007802 I 0.000
ENSMPUG00000002786 Mustela putorius furo ENSMPUG00000002786 I 0.000
ENSNLEG00000027055 Nomascus leucogenys ENSNLEG00000027055 I 0.000
ENSOARG00000009064 Ovis aries ENSOARG00000009064 I 0.000
ENSONIG00000016036 Oreochromis niloticus ENSONIG00000016036 I 0.000
ENSP00000357881 Macaca fascicularis ENSP00000357881 I 0.000
ENSPANG00000020471 Papio anubis ENSPANG00000020471 I 0.000
ENSPPYG00000002727 Pongo abelii ENSPPYG00000002727 I 0.000
ENSPSIG00000008029 Pelodiscus sinensis ENSPSIG00000008029 I 0.000
ENSSHAG00000011508 Sarcophilus harrisii ENSSHAG00000011508 I 0.000
ENSSTOG00000028669 Ictidomys tridecemlineatus ENSSTOG00000028669 I 0.000
ENSTGUG00000011361 Taeniopygia guttata ENSTGUG00000011361 I 0.000
ENSTSYG00000003383 Tarsius syrichta ENSTSYG00000003383 I 0.000
ENSXMAG00000016661 Xiphophorus maculatus ENSXMAG00000016661 I 0.000
Gfo_R011989 Geospiza fortis Gfo_R011989 I 0.000
IKZF5 Equus caballus ENSECAG00000006987 I 0.000
IKZF5 Meleagris gallopavo ENSMGAG00000011599 I 0.000
IKZF5 Takifugu rubripes ENSTRUG00000010762 I 0.000
IKZF5 Dasypus novemcinctus ENSDNOG00000011974 I 0.000
ikzf5 Danio rerio ENSDARG00000056491 I 0.000
IKZF5 Callithrix jacchus ENSCJAG00000001109 I 0.000
IKZF5 Tupaia belangeri ENSTBEG00000004379 I 0.000
IKZF5 Canis familiaris ENSCAFG00000030765 I 0.000
IKZF5 Bos taurus ENSBTAG00000023847 I 0.000
IKZF5 Sus scrofa ENSSSCG00000023565 I 0.000
ikzf5 Xenopus tropicalis XB-GENE-978531 I 0.000
IKZF5 Pteropus vampyrus ENSPVAG00000016435 I 0.000
IKZF5 Loxodonta africana ENSLAFG00000012381 I 0.000
IKZF5 Gorilla gorilla ENSGGOG00000003823 I 0.000
IKZF5 Myotis lucifugus ENSMLUG00000009538 I 0.000
IKZF5 Macaca mulatta ENSMMUG00000023480 I 0.000
ikzf5 Gasterosteus aculeatus ENSGACG00000009720 I 0.000
IKZF5 Homo sapiens ENSG00000095574 I 0.000
Ikzf5 Mus musculus ENSMUSG00000040167 D 0.000
IKZF5 Felis catus ENSFCAG00000009589 I 0.000
IKZF5 Ornithorhynchus anatinus ENSOANG00000001994 I 0.000
IKZF5 Anolis carolinensis ENSACAG00000017468 I 0.000
IKZF5 Oryctolagus cuniculus ENSOCUG00000013340 I 0.000
IKZF5 Otolemur garnettii ENSOGAG00000032070 I 0.000
IKZF5 Ochotona princeps ENSOPRG00000014214 I 0.000
IKZF5 Procavia capensis ENSPCAG00000012387 I 0.000
IKZF5 Pan troglodytes ENSPTRG00000003019 I 0.000
Ikzf5 Rattus norvegicus ENSRNOG00000025651 I 0.000
ikzf5.L Xenopus laevis XB-GENE-978537 I 0.000
Myotis_brandtii_IKZF5_10011368 Myotis brandtii Myotis_brandtii_IKZF5_10011368 I 0.000
Myotis_brandtii_IKZF5_10011632 Myotis brandtii Myotis_brandtii_IKZF5_10011632 I 0.000
Pvit_17596 Pogona vitticeps Pvit_17596 I 0.000
Tal_R009868 Tyto alba Tal_R009868 I 0.000