Myotis_brandtii_ARID3A_10015586 (Myotis brandtii)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Myotis_brandtii_ARID3A_10015586 T015916_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.785 1.000
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.785 1.000
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.785 1.000
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.785 1.000
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.785 1.000
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.785 0.988
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.720 0.779
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.706 0.837
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.706 0.837
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.706 0.837
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.706 0.837
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.695 0.895
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.694 0.488
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.683 0.686
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.554 0.419
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.521 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ARID3A_10015586 ARID/BRIGHT 136 222

Links

Other ARID/BRIGHT family TFs
Other Myotis brandtii TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cebpd Gasterosteus aculeatus ENSGACG00000017927 I 0.000
CEBPD Otolemur garnettii ENSOGAG00000030449 I 0.000
CEBPD Pan troglodytes ENSPTRG00000042020 I 0.000
CEBPD Monodelphis domestica ENSMODG00000010525 I 0.000
CEBPD Macaca mulatta ENSMMUG00000013151 I 0.000
Cebpd Rattus norvegicus ENSRNOG00000050869 D 0.000
CEBPD Taeniopygia guttata ENSTGUG00000010839 I 0.000
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I 0.000
CEBPD Gorilla gorilla ENSGGOG00000008077 I 0.000
CEBPD Homo sapiens ENSG00000221869 D 0.000
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I 0.000
cebpd Danio rerio ENSDARG00000087303 I 0.000
cebpd Xenopus tropicalis XB-GENE-853588 I 0.000
CEBPD Callithrix jacchus ENSCJAG00000013678 I 0.000
Cebpd Mus musculus BAE29047.1 D 0.000
CEBPD Anolis carolinensis ENSACAG00000012009 I 0.000
cebpd.L Xenopus laevis XB-GENE-17330367 I 0.000
cebpd.S Xenopus laevis XB-GENE-866497 I 0.000
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I 0.000
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I 0.000
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I 0.000
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I 0.000
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I 0.000
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I 0.000
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I 0.000
ENSMPUG00000001146 Mustela putorius furo ENSMPUG00000001146 I 0.000
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I 0.000
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I 0.000
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I 0.000
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I 0.000
ENSPANG00000024953 Papio anubis ENSPANG00000024953 I 0.000
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I 0.000
ENSPPYG00000018572 Pongo abelii ENSPPYG00000018572 I 0.000
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I 0.000
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I 0.000
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I 0.000
Pvit_15371 Pogona vitticeps Pvit_15371 I 0.000