CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000162827
(
Malus domestica
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
MDP0000162827
T016139_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000162827
ARID/BRIGHT
100
188
DSKTFELEYNRFLEDRCGKKLRKRVVFQGEELDLCKLFNAVKRYGGYDKVLKGKKWGEVARFVRLVKGISECSKHVLCQLYRDHLYDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Malus domestica
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g024250
Brassica oleracea
Bo1g024250
N
0.000
Bostr.10689s0100
Boechera stricta
Bostr.10689s0100
N
0.000
Cagra.3519s0007
Capsella grandiflora
Cagra.3519s0007
N
0.000
Carubv10004192m.g
Capsella rubella
Carubv10004192m.g
N
0.000
Thhalv10024526m.g
Eutrema salsugineum
Thhalv10024526m.g
N
0.000
VAL3
Arabidopsis thaliana
AT4G21550
N
0.000