Bo5g027930 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo5g027930 T018678_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.929 0.929
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g027930.1 B3 155 257

Links

Other B3 family TFs
Other Brassica oleracea TFs

513 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac032 Vitis vinifera VIT_18s0001g02300 I
ATAF1 Arabidopsis lyrata scaffold_100066.1 I
BGIOSGA000374 Oryza indica BGIOSGA000374 I
BGIOSGA019897 Oryza indica BGIOSGA019897 I
Bo5g001100 Brassica oleracea Bo5g001100 I
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I
Bra033239 Brassica rapa Bra033239 I
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I
Carubv10009926m.g Capsella rubella Carubv10009926m.g I
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I
F775_28813 Aegilops tauschii F775_28813 I
GLYMA05G32850 Glycine max GLYMA05G32850 I
GLYMA14G24220 Glycine max GLYMA14G24220 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
GRMZM2G014653 Zea mays GRMZM2G014653 I
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I
LPERR01G34090 Leersia perrieri LPERR01G34090 I
LPERR05G13490 Leersia perrieri LPERR05G13490 I
mgf004020m Mimulus guttatus mgf004020m I
MLOC_59162 Hordeum vulgare MLOC_59162 I
MTR_8g094580 Medicago truncatula MTR_8g094580 I
NAC002 Arabidopsis thaliana AT1G01720 D
NAC48 Oryza sativa OS01G0884300 D
OB01G48340 Oryza brachyantha OB01G48340 I
OB05G24820 Oryza brachyantha OB05G24820 I
OBART01G39590 Oryza barthii OBART01G39590 I
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I
OMERI01G36460 Oryza meridionalis OMERI01G36460 I
ONIVA01G44460 Oryza nivara ONIVA01G44460 I
ONIVA05G17670 Oryza nivara ONIVA05G17670 I
OPUNC01G38300 Oryza punctata OPUNC01G38300 I
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I
Pavir.J04049 Panicum virgatum Pavir.J04049 I
PK26157.1 Cannabis sativa PK26157.1 I
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I
Sb03g041920 Sorghum bicolor Sb03g041920 I
Si002413m.g Setaria italica Si002413m.g I
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I
TCM_035160 Theobroma cacao TCM_035160 I
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I
TRIUR3_14109 Triticum urartu TRIUR3_14109 I