Bo8g011550 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo8g011550 T018729_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.874 0.874
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.874 0.874
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g011550.1 B3 71 165

Links

Other B3 family TFs
Other Brassica oleracea TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g076230 Brassica oleracea Bo5g076230 I 0.863
Bostr.26675s0223 Boechera stricta Bostr.26675s0223 I 0.874
Bra014192 Brassica rapa Bra014192 I 0.832
Bra032286 Brassica rapa Bra032286 I 0.863
Cagra.4084s0003 Capsella grandiflora Cagra.4084s0003 I 0.874
Carubv10010224m.g Capsella rubella Carubv10010224m.g I 0.874
Gorai.013G039800 Gossypium raimondii Gorai.013G039800 I 0.716
REM19 Arabidopsis thaliana AT1G49480 D 0.874
RTV1 Arabidopsis lyrata scaffold_104641.1 I 0.874
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.747
Thhalv10012062m.g Eutrema salsugineum Thhalv10012062m.g I 0.884