Bra014192 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra014192 T018826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.894 0.894
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.894 0.894
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra014192.1-P B3 128 213

Links

Other B3 family TFs
Other Brassica rapa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_114358 Agaricus bisporus AGABI2DRAFT_114358 N
CC1G_13688 Coprinopsis cinerea CC1G_13688 N
CERSUDRAFT_110536 Ceriporiopsis subvermispora CERSUDRAFT_110536 N
CY34DRAFT_22011 Suillus luteus CY34DRAFT_22011 N
fgenesh1_pg.C_scaffold_11000203 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000203 N
FIBRA_00291 Fibroporia radiculosa FIBRA_00291 N
FOMPIDRAFT_1141437 Fomitopsis pinicola FOMPIDRAFT_1141437 N
GALMADRAFT_83961 Galerina marginata GALMADRAFT_83961 N
GLOTRDRAFT_52937 Gloeophyllum trabeum GLOTRDRAFT_52937 N
JAAARDRAFT_119629 Jaapia argillacea JAAARDRAFT_119629 N
K443DRAFT_673333 Laccaria amethystina K443DRAFT_673333 N
LACBIDRAFT_300968 Laccaria bicolor LACBIDRAFT_300968 N
M378DRAFT_115389 Amanita muscaria M378DRAFT_115389 N
M413DRAFT_22486 Hebeloma cylindrosporum M413DRAFT_22486 N
Moror_914 Moniliophthora roreri Moror_914 N
PAXRUDRAFT_23347 Paxillus rubicundulus PAXRUDRAFT_23347 N
PHACADRAFT_190379 Phanerochaete carnosa PHACADRAFT_190379 N
PHLGIDRAFT_17608 Phlebiopsis gigantea PHLGIDRAFT_17608 N
PILCRDRAFT_827282 Piloderma croceum PILCRDRAFT_827282 N
PISMIDRAFT_646612 Pisolithus microcarpus PISMIDRAFT_646612 N
PLEOSDRAFT_1054066 Pleurotus ostreatus PLEOSDRAFT_1054066 N
SCHCODRAFT_13378 Schizophyllum commune SCHCODRAFT_13378 N
SCLCIDRAFT_110688 Scleroderma citrinum SCLCIDRAFT_110688 N
SERLA73DRAFT_174218 Serpula lacrymans SERLA73DRAFT_174218 N