SapurV1A.2089s0010 (Salix purpurea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 SapurV1A.2089s0010 T024179_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VRN1
M06704_2.00 		Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN
NAMAAAAAAAAAAAAAAAAAAAAAAAWWW		 Dap-seq
OMalley et al.(2016)
VRN1_col_a 		0.725 0.725
VRN1
M06705_2.00 		Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB
VMMAAAAAAAAAAAANVWN		 Dap-seq
OMalley et al.(2016)
VRN1_colamp_a 		0.725 0.725
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.2089s0010.1.p B3 5 98
SapurV1A.2089s0010.1.p B3 274 368
SapurV1A.2089s0010.2.p B3 5 98
SapurV1A.2089s0010.3.p B3 5 98

Links

Other B3 family TFs
Other Salix purpurea TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003278 Calypte anna Aan_R003278 N
Afo_R003266 Aptenodytes forsteri Afo_R003266 N
Alligator_sinensis_CCG001703.1 Alligator sinensis Alligator_sinensis_CCG001703.1 I
Cmyd_10017446 Chelonia mydas Cmyd_10017446 I
ENSAPLG00000014633 Anas platyrhynchos ENSAPLG00000014633 N
ENSFALG00000012974 Ficedula albicollis ENSFALG00000012974 N
ENSLACG00000017707 Latimeria chalumnae ENSLACG00000017707 I
ENSPSIG00000003607 Pelodiscus sinensis ENSPSIG00000003607 I
Ogr08528 Ophisaurus gracilis Ogr08528 N
Pvit_03333 Pogona vitticeps Pvit_03333 N
SNAI1 Taeniopygia guttata ENSTGUG00000008724 N
snai1 Xenopus tropicalis XB-GENE-479970 I
SNAI1 Anolis carolinensis ENSACAG00000015607 N
SNAI1 Ornithorhynchus anatinus ENSOANG00000008681 N
SNAI1 Meleagris gallopavo ENSMGAG00000009447 N
SNAI1 Gallus gallus ENSGALG00000008018 N
snai1.S Xenopus laevis XB-GENE-865328 I