Thhalv10012062m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10012062m.g T024235_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.979 0.979
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012062m B3 127 221

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G14190 Brachypodium distachyon BRADI4G14190 N
GRMZM2G133675 Zea mays GRMZM2G133675 N
OB11G24570 Oryza brachyantha OB11G24570 N
ORGLA11G0160400 Oryza glaberrima ORGLA11G0160400 N
OS11G0601700 Oryza sativa OS11G0601700 N
Pavir.Ha00418 Panicum virgatum Pavir.Ha00418 N
Pavir.J36771 Panicum virgatum Pavir.J36771 N
Sb05g023730 Sorghum bicolor Sb05g023730 N
Si026752m.g Setaria italica Si026752m.g N