chr1.CM0195.10.nd (Lotus japonicus)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 chr1.CM0195.10.nd T024918_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0195.10.nd BBR 1 337

Links

Other BBR family TFs
Other Lotus japonicus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_059380 Acremonium chrysogenum ACRE_059380 N
BBA_02350 Beauveria bassiana BBA_02350 N
CCM_03446 Cordyceps militaris CCM_03446 N
CPUR_07239 Claviceps purpurea CPUR_07239 N
e_gw1.2.1343.1 Nectria haematococca e_gw1.2.1343.1 N
FFUJ_06166 Fusarium fujikuroi FFUJ_06166 N
FGRRES_08646 Fusarium graminearum FGRRES_08646 N
FOXG_03154 Fusarium oxysporum FOXG_03154 N
FPSE_11569 Fusarium pseudograminearum FPSE_11569 N
MAC_00924 Metarhizium acridum MAC_00924 N
MAJ_03821 Metarhizium majus MAJ_03821 N
MAM_03208 Metarhizium album MAM_03208 N
MBR_08316 Metarhizium brunneum MBR_08316 N
MGU_03487 Metarhizium guizhouense MGU_03487 N
NechaG36483 Fusarium solani NechaG36483 N
OCS_00981 Ophiocordyceps sinensis OCS_00981 N
TRIATDRAFT_293987 Trichoderma atroviride TRIATDRAFT_293987 N
TRIREDRAFT_106048 Trichoderma reesei TRIREDRAFT_106048 N
TRIVIDRAFT_212951 Trichoderma virens TRIVIDRAFT_212951 N
VHEMI06982 Torrubiella hemipterigena VHEMI06982 N
X797_003612 Metarhizium robertsii X797_003612 N