CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB08G14980
(
Oryza brachyantha
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OB08G14980
T027055_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB08G14980.1
BED ZF
33
83
SKVWDEYKPIYVNGAIQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
OB08G14980.1
BED ZF
132
176
SKVWEEFRPFLVEGKIQSAECVHCHKLLTADKGRSHLNRHAQTCP
Links
Other
BED ZF
family TFs
Other
Oryza brachyantha
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028099
Oryza indica
BGIOSGA028099
N
0.872
ONIVA08G04740
Oryza nivara
ONIVA08G04740
N
0.872
OPUNC08G04700
Oryza punctata
OPUNC08G04700
N
0.872
ORUFI08G05400
Oryza rufipogon
ORUFI08G05400
N
0.872
OS08G0180500
Oryza sativa
OS08G0180500
N
0.872
Pavir.Fb00509
Panicum virgatum
Pavir.Fb00509
N
0.802
Pavir.J16563
Panicum virgatum
Pavir.J16563
N
0.791
Sb07g005045
Sorghum bicolor
Sb07g005045
N
0.837
Si013272m.g
Setaria italica
Si013272m.g
N
0.767