CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA05G0237000
(
Oryza glaberrima
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ORGLA05G0237000
T027151_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA05G0237000.1
BED ZF
109
160
SVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASCP
Links
Other
BED ZF
family TFs
Other
Oryza glaberrima
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_90194
Phytophthora capsici
estExt_fgenesh1_pg.C_90194
N
F443_16826
Phytophthora parasitica
F443_16826
N
fgenesh_scip_prom.28083.3493
Phytophthora lateralis
fgenesh_scip_prom.28083.3493
N
fgenesh_scip_prom.46568.8418
Phytophthora kernoviae
fgenesh_scip_prom.46568.8418
N
HpaG808627
Hyaloperonospora arabidopsidis
HpaG808627
N
Phyra84539
Phytophthora ramorum
Phyra84539
N
Physo142772
Phytophthora sojae
Physo142772
N