CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS04G0628400
(
Oryza sativa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OS04G0628400
T027196_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0628400-01
BED ZF
46
92
SKVWEEYKPIFLNGKVQFAECLYCHNRLSCKDSNGTSHLWRHQKICP
OS04T0628400-01
BED ZF
147
196
SKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFGGRSHLSRHLITCAGRR
OS04T0628400-02
BED ZF
46
92
SKVWEEYKPIFLNGKVQFAECLYCHNRLSCKDSNGTSHLWRHQKICP
OS04T0628400-02
BED ZF
147
196
SKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFGGRSHLSRHLITCAGRR
OS04T0628400-03
BED ZF
46
92
SKVWEEYKPIFLNGKVQFAECLYCHNRLSCKDSNGTSHLWRHQKICP
OS04T0628400-03
BED ZF
147
196
SKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFGGRSHLSRHLITCAGRR
OS04T0628400-04
BED ZF
46
92
SKVWEEYKPIFLNGKVQFAECLYCHNRLSCKDSNGTSHLWRHQKICP
OS04T0628400-04
BED ZF
147
196
SKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFGGRSHLSRHLITCAGRR
Links
Other
BED ZF
family TFs
Other
Oryza sativa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP18236
Atta cephalotes
ACEP18236
N
ACYPI083866
Acyrthosiphon pisum
ACYPI083866
N
ACYPI20871
Acyrthosiphon pisum
ACYPI20871
N
ACYPI21081
Acyrthosiphon pisum
ACYPI21081
N
ACYPI21993
Acyrthosiphon pisum
ACYPI21993
N
ACYPI27688
Acyrthosiphon pisum
ACYPI27688
N
ADIR014323
Anopheles dirus
ADIR014323
N
Cflo_16168--NA
Camponotus floridanus
Cflo_16168--NA
N
GPLIN_000816000
Globodera pallida
GPLIN_000816000
N
Hba_06305
Heterorhabditis bacteriophora
Hba_06305
N
LDEC000062
Leptinotarsa decemlineata
LDEC000062
N
LDEC003385
Leptinotarsa decemlineata
LDEC003385
N
MCINX014771
Melitaea cinxia
MCINX014771
N
MDOA010546
Musca domestica
MDOA010546
N
SINV10593
Solenopsis invicta
SINV10593
N