VIT_16s0050g02440 (Vitis vinifera)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 VIT_16s0050g02440 T027889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0050g02440.t01 BED ZF 59 102

Links

Other BED ZF family TFs
Other Vitis vinifera TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006547 Ricinus communis 30169.m006547 N 0.975
AT1G79740 Arabidopsis thaliana AT1G79740 N 0.825
Carubv10019846m.g Capsella rubella Carubv10019846m.g N 0.825
Cla004997 Citrullus lanatus Cla004997 N 0.950
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.950
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.875
gene13122-v1.0-hybrid Fragaria vesca gene13122-v1.0-hybrid N 0.925
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.950
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.750
MDP0000411586 Malus domestica MDP0000411586 N 0.900
MDP0000520527 Malus domestica MDP0000520527 N 0.900
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.718
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.700
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.872
PK04121.1 Cannabis sativa PK04121.1 N 0.975
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.975
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.700
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.846
TCM_015328 Theobroma cacao TCM_015328 N 1.000