CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm014562
(
Prunus mume
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pm014562
T028028_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm014562
BED ZF
16
63
SVVWNDFDRIKKGDKCIAVCRHCKKKLSGSSTSGTSHLRNHLIRCQRR
Links
Other
BED ZF
family TFs
Other
Prunus mume
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010551
Calypte anna
Aan_R010551
N
AAV49747
Xenopus laevis
AAV49747
N
Afo_R015981
Aptenodytes forsteri
Afo_R015981
N
ahr.S
Xenopus laevis
XB-GENE-983111
N
ahr1b
Danio rerio
ENSDARG00000023537
N
ahrr
Takifugu rubripes
ENSTRUG00000003745
N
AHRR
Anolis carolinensis
ENSACAG00000008710
N
AHRR
Monodelphis domestica
ENSMODG00000000638
N
AHRR
Callithrix jacchus
ENSCJAG00000017613
N
Brh_R005005
Buceros rhinoceros
Brh_R005005
N
ENSAMXG00000013907
Astyanax mexicanus
ENSAMXG00000013907
N
ENSFALG00000004883
Ficedula albicollis
ENSFALG00000004883
N
ENSLACG00000012651
Latimeria chalumnae
ENSLACG00000012651
N
ENSLOCG00000013271
Lepisosteus oculatus
ENSLOCG00000013271
N
Gfo_R006189
Geospiza fortis
Gfo_R006189
N
JC7993
Xenopus laevis
JC7993
N
Pvit_18498
Pogona vitticeps
Pvit_18498
N