CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cucsa.057910
(
Cucumis sativus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Cucsa.057910
T028080_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.057910.1
BED ZF
17
65
SVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRS
Cucsa.057910.2
BED ZF
17
65
SVVWNHFERVRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRS
Links
Other
BED ZF
family TFs
Other
Cucumis sativus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA18499
Drosophila pseudoobscura
FBgn0078501
N
GD23776
Drosophila simulans
FBgn0195148
N
GE18524
Drosophila yakuba
FBgn0235935
N
GF14772
Drosophila ananassae
FBgn0091799
N
GG23720
Drosophila erecta
FBgn0115861
N
GH13393
Drosophila grimshawi
FBgn0120869
N
GI20716
Drosophila mojavensis
FBgn0143451
N
GJ13301
Drosophila virilis
FBgn0200527
N
GK21060
Drosophila willistoni
FBgn0223052
N
GM19017
Drosophila sechellia
FBgn0173920
N
MDOA013256
Musca domestica
MDOA013256
N
salr
Drosophila melanogaster
FBgn0000287
N