CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene24495-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene24495-v1.0-hybrid
T028299_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24495.1-v1.0-hybrid
BED ZF
584
631
SVVWNDFDRIKKGDSCIAVCRHCKKKLSGSSTSGTSHLRNHLIRCQRR
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.200547
Amphimedon queenslandica
Aqu1.200547
N
Aqu1.200775
Amphimedon queenslandica
Aqu1.200775
N
Aqu1.202374
Amphimedon queenslandica
Aqu1.202374
N
Aqu1.203266
Amphimedon queenslandica
Aqu1.203266
N
Aqu1.203383
Amphimedon queenslandica
Aqu1.203383
N
Aqu1.203693
Amphimedon queenslandica
Aqu1.203693
N
Aqu1.204680
Amphimedon queenslandica
Aqu1.204680
N
Aqu1.205713
Amphimedon queenslandica
Aqu1.205713
N
Aqu1.209164
Amphimedon queenslandica
Aqu1.209164
N
Aqu1.210475
Amphimedon queenslandica
Aqu1.210475
N
Aqu1.211204
Amphimedon queenslandica
Aqu1.211204
N
Aqu1.215899
Amphimedon queenslandica
Aqu1.215899
N
Aqu1.216992
Amphimedon queenslandica
Aqu1.216992
N
Aqu1.217592
Amphimedon queenslandica
Aqu1.217592
N
Aqu1.219278
Amphimedon queenslandica
Aqu1.219278
N
Aqu1.220092
Amphimedon queenslandica
Aqu1.220092
N
Aqu1.220383
Amphimedon queenslandica
Aqu1.220383
N
Aqu1.225136
Amphimedon queenslandica
Aqu1.225136
N