PK12364.1 (Cannabis sativa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PK12364.1 T028799_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK12364.1 BED ZF 22 70

Links

Other BED ZF family TFs
Other Cannabis sativa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28609.m000209 Ricinus communis 28609.m000209 N
AC216731.3_FG001 Zea mays AC216731.3_FG001 N
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N
BGIOSGA002533 Oryza indica BGIOSGA002533 N
BGIOSGA008903 Oryza indica BGIOSGA008903 N
BHLH83 Arabidopsis thaliana AT1G66470 N
BHLH86 Arabidopsis thaliana AT5G37800 N
Bo00835s050 Brassica oleracea Bo00835s050 N
Bo6g101000 Brassica oleracea Bo6g101000 N
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N
Bra019708 Brassica rapa Bra019708 N
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N
Cagra.8123s0001 Capsella grandiflora Cagra.8123s0001 N
Carubv10007389m.g Capsella rubella Carubv10007389m.g N
Carubv10021322m.g Capsella rubella Carubv10021322m.g N
cassava10199.m1 Manihot esculenta cassava10199.m1 N
Ca_16136 Cicer arietinum Ca_16136 N
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N
Cla020067 Citrullus lanatus Cla020067 N
Cucsa.006340 Cucumis sativus Cucsa.006340 N
estExt_fgenesh1_pg.C_1470079 Physcomitrella patens estExt_fgenesh1_pg.C_1470079 N
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N
F775_02947 Aegilops tauschii F775_02947 N
F775_23458 Aegilops tauschii F775_23458 N
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N
GLYMA02G41370 Glycine max GLYMA02G41370 N
GLYMA11G33840 Glycine max GLYMA11G33840 N
GLYMA14G07590 Glycine max GLYMA14G07590 N
GLYMA18G04420 Glycine max GLYMA18G04420 N
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N
GRMZM2G066057 Zea mays GRMZM2G066057 N
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N
LPERR01G00690 Leersia perrieri LPERR01G00690 N
LPERR02G24230 Leersia perrieri LPERR02G24230 N
Lus10017634.g Linum usitatissimum Lus10017634.g N
Lus10033592.g Linum usitatissimum Lus10033592.g N
MDP0000435722 Malus domestica MDP0000435722 N
mgf025678m Mimulus guttatus mgf025678m N
MLOC_37511 Hordeum vulgare MLOC_37511 N
MTR_5g079500 Medicago truncatula MTR_5g079500 N
OB0081G10010 Oryza brachyantha OB0081G10010 N
OB01G10850 Oryza brachyantha OB01G10850 N
OB02G36990 Oryza brachyantha OB02G36990 N
OBART01G00850 Oryza barthii OBART01G00850 N
OBART02G29800 Oryza barthii OBART02G29800 N
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N
OLONG_010619 Oryza longistaminata OLONG_010619 N
OMERI01G00290 Oryza meridionalis OMERI01G00290 N
OMERI02G28660 Oryza meridionalis OMERI02G28660 N
ONIVA01G00780 Oryza nivara ONIVA01G00780 N
ONIVA02G32560 Oryza nivara ONIVA02G32560 N
OPUNC01G00700 Oryza punctata OPUNC01G00700 N
OPUNC02G27370 Oryza punctata OPUNC02G27370 N
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N
ORUFI01G00830 Oryza rufipogon ORUFI01G00830 N
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N
OS01G0111500 Oryza sativa OS01G0111500 N
OS02G0710300 Oryza sativa OS02G0710300 N
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N
Pavir.Eb00817 Panicum virgatum Pavir.Eb00817 N
Pavir.J04215 Panicum virgatum Pavir.J04215 N
Pavir.J20533 Panicum virgatum Pavir.J20533 N
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N
Pm014359 Prunus mume Pm014359 N
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N
RHD6 Arabidopsis lyrata scaffold_201372.1 N
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N
Sb03g008290 Sorghum bicolor Sb03g008290 N
Sb04g030230 Sorghum bicolor Sb04g030230 N
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N
Si004720m.g Setaria italica Si004720m.g N
Si019575m.g Setaria italica Si019575m.g N
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N
TCM_019210 Theobroma cacao TCM_019210 N
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N
TRIUR3_11692 Triticum urartu TRIUR3_11692 N
TRIUR3_14379 Triticum urartu TRIUR3_14379 N
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N