L892_g30484 (Steinernema scapterisci)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 L892_g30484 T029428_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g30484.t1 BED ZF 143 187

Links

Other BED ZF family TFs
Other Steinernema scapterisci TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC194965.4_FG004 Zea mays AC194965.4_FG004 N
Bra009926 Brassica rapa Bra009926 N
BRADI2G12590 Brachypodium distachyon BRADI2G12590 N
BRADI2G35057 Brachypodium distachyon BRADI2G35057 N
cassava16506.m1 Manihot esculenta cassava16506.m1 N
Eucgr.H01071 Eucalyptus grandis Eucgr.H01071 N
GATA23 Arabidopsis thaliana AT5G26930 N
GRMZM2G052616 Zea mays GRMZM2G052616 N
GRMZM2G104390 Zea mays GRMZM2G104390 N
LPERR01G13070 Leersia perrieri LPERR01G13070 N
OB01G24090 Oryza brachyantha OB01G24090 N
OB05G13650 Oryza brachyantha OB05G13650 N
OBART01G14380 Oryza barthii OBART01G14380 N
OBART05G03900 Oryza barthii OBART05G03900 N
OGLUM01G16180 Oryza glumaepatula OGLUM01G16180 N
OLONG_020882 Oryza longistaminata OLONG_020882 N
ONIVA04G04160 Oryza nivara ONIVA04G04160 N
OPUNC01G14080 Oryza punctata OPUNC01G14080 N
OPUNC05G03600 Oryza punctata OPUNC05G03600 N
ORGLA01G0118700 Oryza glaberrima ORGLA01G0118700 N
ORGLA05G0036200 Oryza glaberrima ORGLA05G0036200 N
ORUFI01G16060 Oryza rufipogon ORUFI01G16060 N
OS01G0343300 Oryza sativa OS01G0343300 N
OS05G0155400 Oryza sativa OS05G0155400 N
Pavir.Ea01306 Panicum virgatum Pavir.Ea01306 N
Pavir.Eb02364 Panicum virgatum Pavir.Eb02364 N
Pavir.J31164 Panicum virgatum Pavir.J31164 N
Pavir.J34225 Panicum virgatum Pavir.J34225 N
Sb03g013700 Sorghum bicolor Sb03g013700 N
Sb09g004315 Sorghum bicolor Sb09g004315 N
Si004417m.g Setaria italica Si004417m.g N
Si011269m.g Setaria italica Si011269m.g N