Bo1g024080 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo1g024080 T031074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.864 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g024080.1 bHLH 33 81

Links

Other bHLH family TFs
Other Brassica oleracea TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g162600 Brassica oleracea Bo3g162600 I 0.884
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I 0.884
Bra013519 Brassica rapa Bra013519 I 0.884
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I 0.840
Carubv10007380m.g Capsella rubella Carubv10007380m.g I 0.840
DYT1 Arabidopsis thaliana AT4G21330 D 0.864
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I 0.884
MTR_4g091910 Medicago truncatula MTR_4g091910 I 0.851
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I 0.864