Bra013128 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra013128 T031417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.878 0.720
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.850 0.540
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013128.1-P bHLH 92 141

Links

Other bHLH family TFs
Other Brassica rapa TFs

339 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008370 Ailuropoda melanoleuca ENSAMEG00000008370 N 0.000
ENSCSAG00000010349 Chlorocebus sabaeus ENSCSAG00000010349 N 0.000
ENSMPUG00000015262 Mustela putorius furo ENSMPUG00000015262 N 0.000
ENSP00000382575 Macaca fascicularis ENSP00000382575 N 0.000
ENSP00000382575-D1 Bos grunniens ENSP00000382575-D1 N 0.000
ENSPANG00000009601 Papio anubis ENSPANG00000009601 N 0.000
ENSPPYG00000007019 Pongo abelii ENSPPYG00000007019 N 0.000
ENSSTOG00000015412 Ictidomys tridecemlineatus ENSSTOG00000015412 N 0.000
FLYWCH1 Bos taurus ENSBTAG00000006117 N 0.000
FLYWCH1 Tursiops truncatus ENSTTRG00000016604 N 0.000
FLYWCH1 Sus scrofa ENSSSCG00000028381 N 0.000
Flywch1 Rattus norvegicus ENSRNOG00000004333 N 0.000
FLYWCH1 Pteropus vampyrus ENSPVAG00000008985 N 0.000
FLYWCH1 Pan troglodytes ENSPTRG00000007671 N 0.000
FLYWCH1 Ochotona princeps ENSOPRG00000016761 N 0.000
FLYWCH1 Otolemur garnettii ENSOGAG00000013824 N 0.000
Flywch1 Mus musculus ENSMUSG00000040097 N 0.000
FLYWCH1 Macaca mulatta ENSMMUG00000015884 N 0.000
FLYWCH1 Myotis lucifugus ENSMLUG00000005535 N 0.000
FLYWCH1 Loxodonta africana ENSLAFG00000008304 N 0.000
FLYWCH1 Gorilla gorilla ENSGGOG00000001804 N 0.000
FLYWCH1 Homo sapiens ENSG00000059122 N 0.000
FLYWCH1 Equus caballus ENSECAG00000003259 N 0.000
FLYWCH1 Dasypus novemcinctus ENSDNOG00000031962 N 0.000
FLYWCH1 Cavia porcellus ENSCPOG00000007496 N 0.000
FLYWCH1 Callithrix jacchus ENSCJAG00000015381 N 0.000
FLYWCH1 Canis familiaris ENSCAFG00000019343 N 0.000
Myotis_brandtii_FLYWCH1_10002360 Myotis brandtii Myotis_brandtii_FLYWCH1_10002360 N 0.000