CGI_10006402 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10006402 T032089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.882 0.925
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.882 0.925
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.882 0.925
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.882 0.925
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.882 0.925
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.882 0.925
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.882 0.925
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.882 0.925
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.882 0.925
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.858 0.943
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.858 0.943
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.858 0.943
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.858 0.943
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC20258 bHLH 110 162

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Alligator_sinensis_CCG020461.1 Alligator sinensis Alligator_sinensis_CCG020461.1 I 0.000
BGIBMGA001129 Bombyx mori BGIBMGA001129 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
EmuJ_000606300 Echinococcus multilocularis EmuJ_000606300 N 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
ENSLOCG00000009736 Lepisosteus oculatus ENSLOCG00000009736 I 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
Pvit_05988 Pogona vitticeps Pvit_05988 I 0.000
TASK_0000581501 Taenia asiatica TASK_0000581501 N 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD3 Macaca mulatta ENSMMUG00000015909 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
tead3a Gasterosteus aculeatus ENSGACG00000009758 I 0.000
tead3a Takifugu rubripes ENSTRUG00000011546 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000
TTAC_0000616001 Hydatigera taeniaeformis TTAC_0000616001 N 0.000