ENSONIG00000007897 (Oreochromis niloticus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSONIG00000007897 T036213_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYOD1
M04116_2.00 		Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1 		0.894 0.923
MYOD1
M04117_2.00 		Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2 		0.894 0.923
MYOD1
M04120_2.00 		Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1 		0.894 0.923
MYOD1
M04121_2.00 		Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2 		0.894 0.923
Myod1
M08060_2.00 		Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN		 ChIP-seq
Mathelier et al.(2014)
MA0499.1 		0.894 0.923
MYOD1
M08724_2.00 		Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A 		0.894 0.923
Myod1
M08745_2.00 		Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN		 Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A 		0.894 0.923
MYOD1
M09838_2.00 		Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD		 Transfac
Matys et al.(2006)
V$MYOD_01 		0.894 0.923
MYOD1
M09839_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYOD_Q6_02 		0.894 0.923
MYOD1
M09840_2.00 		Homo sapiens
NVCABCTGNY
RNCAGVTGBN		 Transfac
Matys et al.(2006)
V$MYOD_Q6 		0.894 0.923
MYOD1
M04118_2.00 		Homo sapiens
BAACANVTGTYV
BRACABNTGTTV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1 		0.894 0.923
MYOD1
M04119_2.00 		Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV		 SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2 		0.894 0.923
MYOD1
M04122_2.00 		Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1 		0.894 0.923
MYOD1
M04123_2.00 		Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV		 SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2 		0.894 0.923
nau
M03600_2.00 		Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH		 SELEX
Nitta et al.(2015)
nau_1 		0.846 0.865
nau
M03601_2.00 		Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN		 SELEX
Nitta et al.(2015)
nau_2 		0.846 0.865
nau
M03602_2.00 		Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY		 SELEX
Nitta et al.(2015)
nau_3 		0.846 0.865
nau
M05949_2.00 		Drosophila melanogaster
CACCTGYY
RRCAGGTG		 B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922 		0.846 0.865
nau
M05950_2.00 		Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY		 B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922 		0.846 0.865
Myf5
M09463_2.00 		Mus musculus
NRRCAGCTGY
RCAGCTGYYN		 Misc
Heinz et al.(2010)
GM-Myf5_GSE24852 		0.840 0.904
MYF5
M09821_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MYF5_Q6 		0.840 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000009955 bHLH 91 142

Links

Other bHLH family TFs
Other Oreochromis niloticus TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30054.m000786 Ricinus communis 30054.m000786 I 0.000
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.000
APRR2 Arabidopsis thaliana AT4G18020 D 0.000
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.000
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.000
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.000
Bo1g019180 Brassica oleracea Bo1g019180 I 0.000
Bo7g105690 Brassica oleracea Bo7g105690 I 0.000
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.000
Bra012623 Brassica rapa Bra012623 I 0.000
Bra013277 Brassica rapa Bra013277 I 0.000
Bra013278 Brassica rapa Bra013278 I 0.000
Bra013279 Brassica rapa Bra013279 I 0.000
Bra036015 Brassica rapa Bra036015 I 0.000
BRADI2G08287 Brachypodium distachyon BRADI2G08287 I 0.000
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.000
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.000
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.000
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.000
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.000
Ca_02285 Cicer arietinum Ca_02285 I 0.000
Ca_12825 Cicer arietinum Ca_12825 I 0.000
Ca_24009 Cicer arietinum Ca_24009 I 0.000
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.000
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.000
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.000
Cla008926 Citrullus lanatus Cla008926 I 0.000
Cla016403 Citrullus lanatus Cla016403 I 0.000
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.000
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.000
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.000
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.000
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.000
GLK2 Oryza sativa OS01G0239000 I 0.000
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.000
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.000
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.000
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.000
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.000
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.000
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.000
GSMUA_Achr10G26160_001 Musa acuminata GSMUA_Achr10G26160_001 I 0.000
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.000
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.000
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.000
GSMUA_Achr7G11040_001 Musa acuminata GSMUA_Achr7G11040_001 I 0.000
LPERR01G08320 Leersia perrieri LPERR01G08320 I 0.000
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.000
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.000
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.000
MDP0000237396 Malus domestica MDP0000237396 I 0.000
MDP0000248863 Malus domestica MDP0000248863 I 0.000
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.000
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.000
OGLUM01G10130 Oryza glumaepatula OGLUM01G10130 I 0.000
OMERI01G08840 Oryza meridionalis OMERI01G08840 I 0.000
ONIVA01G11450 Oryza nivara ONIVA01G11450 I 0.000
OPUNC01G08680 Oryza punctata OPUNC01G08680 I 0.000
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.000
ORUFI01G09620 Oryza rufipogon ORUFI01G09620 I 0.000
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.000
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.000
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.000
PK19826.1 Cannabis sativa PK19826.1 I 0.000
Pm014733 Prunus mume Pm014733 I 0.000
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.000
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.000
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.000
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.000
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.000
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.000
Si001336m.g Setaria italica Si001336m.g I 0.000
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.000
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.000
TCM_015780 Theobroma cacao TCM_015780 I 0.000
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.000