Bhlhe23 (Rattus norvegicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSRNOG00000010312 T037190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.890 0.982
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.890 0.982
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.890 0.982
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.890 0.982
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.890 0.982
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.890 0.945
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.890 0.945
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.890 0.945
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.890 0.945
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.890 0.909
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.890 0.909
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.890 0.909
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.890 0.909
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000013690 bHLH 99 153

Links

Other bHLH family TFs
Other Rattus norvegicus TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29737.m001209 Ricinus communis 29737.m001209 I 0.000
29739.m003684 Ricinus communis 29739.m003684 I 0.000
30174.m008814 Ricinus communis 30174.m008814 I 0.000
ALC Arabidopsis thaliana AT5G67110 I 0.000
ALC Arabidopsis lyrata fgenesh2_kg.8__2705__AT5G67110.1 I 0.000
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.000
AMTR_s00129p00124210 Amborella trichopoda AMTR_s00129p00124210 I 0.000
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.000
Aquca_020_00579 Aquilegia coerulea Aquca_020_00579 I 0.000
Aquca_035_00175 Aquilegia coerulea Aquca_035_00175 I 0.000
BGIOSGA006236 Oryza indica BGIOSGA006236 I 0.000
BGIOSGA021743 Oryza indica BGIOSGA021743 I 0.000
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.000
BGIOSGA022375 Oryza indica BGIOSGA022375 I 0.000
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.000
BHLH66 Arabidopsis thaliana AT2G24260 I 0.000
BHLH82 Arabidopsis thaliana AT5G58010 I 0.000
BIM1 Arabidopsis thaliana AT5G08130 D 0.000
BIM1 Arabidopsis lyrata scaffold_600819.1 I 0.000
Bo1g011740 Brassica oleracea Bo1g011740 I 0.000
Bo2g028920 Brassica oleracea Bo2g028920 I 0.000
Bo2g161110 Brassica oleracea Bo2g161110 I 0.000
Bo3g004690 Brassica oleracea Bo3g004690 I 0.000
Bo3g018990 Brassica oleracea Bo3g018990 I 0.000
Bo3g042120 Brassica oleracea Bo3g042120 I 0.000
Bo3g054850 Brassica oleracea Bo3g054850 I 0.000
Bo4g154370 Brassica oleracea Bo4g154370 I 0.000
Bo5g020460 Brassica oleracea Bo5g020460 I 0.000
Bo8g099910 Brassica oleracea Bo8g099910 I 0.000
Bo9g133640 Brassica oleracea Bo9g133640 I 0.000
Bo9g174770 Brassica oleracea Bo9g174770 I 0.000
Bostr.0568s0133 Boechera stricta Bostr.0568s0133 I 0.000
Bostr.13129s0152 Boechera stricta Bostr.13129s0152 I 0.000
Bostr.14547s0014 Boechera stricta Bostr.14547s0014 I 0.000
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.000
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.000
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.000
Bra000560 Brassica rapa Bra000560 I 0.000
Bra002679 Brassica rapa Bra002679 I 0.000
Bra005969 Brassica rapa Bra005969 I 0.000
Bra006788 Brassica rapa Bra006788 I 0.000
Bra007863 Brassica rapa Bra007863 I 0.000
Bra009322 Brassica rapa Bra009322 I 0.000
Bra011237 Brassica rapa Bra011237 I 0.000
Bra012133 Brassica rapa Bra012133 I 0.000
Bra020398 Brassica rapa Bra020398 I 0.000
Bra029354 Brassica rapa Bra029354 I 0.000
Bra032111 Brassica rapa Bra032111 I 0.000
Bra037312 Brassica rapa Bra037312 I 0.000
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.000
BRADI3G46200 Brachypodium distachyon BRADI3G46200 I 0.000
BRADI3G56340 Brachypodium distachyon BRADI3G56340 I 0.000
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.000
Cagra.1365s0019 Capsella grandiflora Cagra.1365s0019 I 0.000
Cagra.20893s0010 Capsella grandiflora Cagra.20893s0010 I 0.000
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.000
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.000
Carubv10000655m.g Capsella rubella Carubv10000655m.g I 0.000
Carubv10001567m.g Capsella rubella Carubv10001567m.g I 0.000
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.000
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.000
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.000
Carubv10028570m.g Capsella rubella Carubv10028570m.g I 0.000
cassava10497.m1 Manihot esculenta cassava10497.m1 I 0.000
cassava13956.valid.m1 Manihot esculenta cassava13956.valid.m1 I 0.000
cassava19894.m1 Manihot esculenta cassava19894.m1 I 0.000
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.000
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.000
Ca_03340 Cicer arietinum Ca_03340 I 0.000
Ca_19269 Cicer arietinum Ca_19269 I 0.000
Ca_22883 Cicer arietinum Ca_22883 I 0.000
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.000
Ciclev10008008m.g Citrus clementina Ciclev10008008m.g I 0.000
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.000
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.000
Ciclev10020053m.g Citrus clementina Ciclev10020053m.g I 0.000
Cla013823 Citrullus lanatus Cla013823 I 0.000
Cla019007 Citrullus lanatus Cla019007 I 0.000
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.000
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.000
Eucgr.B00645 Eucalyptus grandis Eucgr.B00645 I 0.000
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.000
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.000
Eucgr.D02499 Eucalyptus grandis Eucgr.D02499 I 0.000
Eucgr.H02628 Eucalyptus grandis Eucgr.H02628 N 0.000
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.000
evm.TU.supercontig_212.3 Carica papaya evm.TU.supercontig_212.3 I 0.000
evm.TU.supercontig_82.59 Carica papaya evm.TU.supercontig_82.59 I 0.000
e_gw1.167.42.1 Physcomitrella patens e_gw1.167.42.1 I 0.000
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.000
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.000
gene09125-v1.0-hybrid Fragaria vesca gene09125-v1.0-hybrid I 0.000
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.000
gene25546-v1.0-hybrid Fragaria vesca gene25546-v1.0-hybrid I 0.000
GLYMA01G15930 Glycine max GLYMA01G15930 I 0.000
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.000
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.000
GLYMA03G04000 Glycine max GLYMA03G04000 I 0.000
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.000
GLYMA11G17120 Glycine max GLYMA11G17120 I 0.000
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.000
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.000
Gorai.001G017900 Gossypium raimondii Gorai.001G017900 I 0.000
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.000
Gorai.006G269200 Gossypium raimondii Gorai.006G269200 I 0.000
Gorai.007G088300 Gossypium raimondii Gorai.007G088300 I 0.000
Gorai.007G118100 Gossypium raimondii Gorai.007G118100 I 0.000
Gorai.008G106900 Gossypium raimondii Gorai.008G106900 I 0.000
Gorai.009G038500 Gossypium raimondii Gorai.009G038500 I 0.000
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.000
Gorai.012G031100 Gossypium raimondii Gorai.012G031100 I 0.000
GRMZM2G017349 Zea mays GRMZM2G017349 I 0.000
GRMZM2G024530 Zea mays GRMZM2G024530 I 0.000
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.000
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.000
GRMZM2G116785 Zea mays GRMZM2G116785 I 0.000
GRMZM5G839518 Zea mays GRMZM5G839518 I 0.000
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.000
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.000
GSMUA_Achr3G04630_001 Musa acuminata GSMUA_Achr3G04630_001 I 0.000
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I 0.000
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.000
GSMUA_Achr6G35730_001 Musa acuminata GSMUA_Achr6G35730_001 I 0.000
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I 0.000
LPERR02G17000 Leersia perrieri LPERR02G17000 N 0.000
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.000
LPERR06G03910 Leersia perrieri LPERR06G03910 I 0.000
LPERR06G05570 Leersia perrieri LPERR06G05570 I 0.000
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.000
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.000
LRL2 Arabidopsis thaliana AT4G30980 D 0.000
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.000
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.000
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.000
MDP0000121522 Malus domestica MDP0000121522 I 0.000
MDP0000286589 Malus domestica MDP0000286589 N 0.000
MDP0000439540 Malus domestica MDP0000439540 I 0.000
MDP0000534784 Malus domestica MDP0000534784 I 0.000
MDP0000837139 Malus domestica MDP0000837139 I 0.000
mgf001137m Mimulus guttatus mgf001137m I 0.000
mgf001459m Mimulus guttatus mgf001459m I 0.000
mgf005431m Mimulus guttatus mgf005431m I 0.000
mgf005849m Mimulus guttatus mgf005849m I 0.000
mgf009435m Mimulus guttatus mgf009435m I 0.000
mgf014585m Mimulus guttatus mgf014585m I 0.000
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.000
MLOC_62335 Hordeum vulgare MLOC_62335 I 0.000
MTR_1g019240 Medicago truncatula MTR_1g019240 I 0.000
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.000
OB02G28530 Oryza brachyantha OB02G28530 I 0.000
OB06G14990 Oryza brachyantha OB06G14990 I 0.000
OBART02G20940 Oryza barthii OBART02G20940 I 0.000
OBART06G04330 Oryza barthii OBART06G04330 I 0.000
OBART06G05420 Oryza barthii OBART06G05420 I 0.000
OBART06G06000 Oryza barthii OBART06G06000 I 0.000
OGLUM02G21200 Oryza glumaepatula OGLUM02G21200 I 0.000
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.000
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I 0.000
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.000
OGLUM06G06280 Oryza glumaepatula OGLUM06G06280 I 0.000
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.000
OLONG_013313 Oryza longistaminata OLONG_013313 I 0.000
OLONG_025501 Oryza longistaminata OLONG_025501 I 0.000
OMERI02G20700 Oryza meridionalis OMERI02G20700 I 0.000
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.000
OMERI06G05430 Oryza meridionalis OMERI06G05430 I 0.000
OMERI06G07190 Oryza meridionalis OMERI06G07190 I 0.000
ONIVA02G23040 Oryza nivara ONIVA02G23040 I 0.000
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.000
ONIVA06G05510 Oryza nivara ONIVA06G05510 I 0.000
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.000
ONIVA06G06960 Oryza nivara ONIVA06G06960 I 0.000
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.000
OPUNC02G18940 Oryza punctata OPUNC02G18940 I 0.000
OPUNC06G05770 Oryza punctata OPUNC06G05770 I 0.000
orange1.1g010045m.g Citrus sinensis orange1.1g010045m.g I 0.000
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.000
orange1.1g012387m.g Citrus sinensis orange1.1g012387m.g I 0.000
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.000
ORGLA02G0180000 Oryza glaberrima ORGLA02G0180000 I 0.000
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.000
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I 0.000
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.000
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I 0.000
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.000
ORUFI06G06220 Oryza rufipogon ORUFI06G06220 I 0.000
OS02G0564700 Oryza sativa OS02G0564700 I 0.000
OS06G0184000 Oryza sativa OS06G0184000 I 0.000
OS06G0193400 Oryza sativa OS06G0193400 I 0.000
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.000
Pavir.Aa01634 Panicum virgatum Pavir.Aa01634 I 0.000
Pavir.Ab02747 Panicum virgatum Pavir.Ab02747 I 0.000
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.000
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.000
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.000
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.000
Pavir.Db01966 Panicum virgatum Pavir.Db01966 I 0.000
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.000
Pavir.J15280 Panicum virgatum Pavir.J15280 I 0.000
Pavir.J15575 Panicum virgatum Pavir.J15575 I 0.000
Pavir.J38250 Panicum virgatum Pavir.J38250 I 0.000
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.000
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.000
PGSC0003DMG400025976 Solanum tuberosum PGSC0003DMG400025976 I 0.000
PGSC0003DMG401007955 Solanum tuberosum PGSC0003DMG401007955 I 0.000
PK08539.1 Cannabis sativa PK08539.1 I 0.000
PK10562.1 Cannabis sativa PK10562.1 I 0.000
PK14040.1 Cannabis sativa PK14040.1 I 0.000
PK20816.1 Cannabis sativa PK20816.1 I 0.000
Pm027004 Prunus mume Pm027004 I 0.000
Pm027715 Prunus mume Pm027715 I 0.000
POPTR_0002s14430 Populus trichocarpa POPTR_0002s14430 I 0.000
POPTR_0006s13790 Populus trichocarpa POPTR_0006s13790 I 0.000
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.000
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.000
PRUPE_ppa005629mg Prunus persica PRUPE_ppa005629mg I 0.000
PRUPE_ppa017709mg Prunus persica PRUPE_ppa017709mg I 0.000
SapurV1A.0033s0400 Salix purpurea SapurV1A.0033s0400 I 0.000
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.000
SapurV1A.0249s0140 Salix purpurea SapurV1A.0249s0140 I 0.000
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.000
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.000
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.000
Sb04g023320 Sorghum bicolor Sb04g023320 I 0.000
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.000
Sb10g004500 Sorghum bicolor Sb10g004500 I 0.000
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.000
Sb10g006250 Sorghum bicolor Sb10g006250 I 0.000
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.000
SELMODRAFT_425336 Selaginella moellendorffii SELMODRAFT_425336 I 0.000
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.000
Si006332m.g Setaria italica Si006332m.g I 0.000
Si016939m.g Setaria italica Si016939m.g I 0.000
Si017553m.g Setaria italica Si017553m.g I 0.000
Si029708m.g Setaria italica Si029708m.g I 0.000
Solyc01g090790.2 Solanum lycopersicum Solyc01g090790.2 I 0.000
Solyc03g114720.2 Solanum lycopersicum Solyc03g114720.2 I 0.000
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.000
TCM_004959 Theobroma cacao TCM_004959 I 0.000
TCM_005607 Theobroma cacao TCM_005607 I 0.000
TCM_037077 Theobroma cacao TCM_037077 I 0.000
TCM_037455 Theobroma cacao TCM_037455 I 0.000
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.000
Thhalv10004889m.g Eutrema salsugineum Thhalv10004889m.g I 0.000
Thhalv10013181m.g Eutrema salsugineum Thhalv10013181m.g I 0.000
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.000
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.000
Thhalv10028687m.g Eutrema salsugineum Thhalv10028687m.g I 0.000
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.000
Traes_6BL_DA93728B3 Triticum aestivum Traes_6BL_DA93728B3 I 0.000
Traes_6DL_D38F3257B Triticum aestivum Traes_6DL_D38F3257B I 0.000
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.000
UNE10 Arabidopsis thaliana AT4G00050 D 0.000
UNE10 Arabidopsis lyrata scaffold_604304.1 I 0.000
UNE10 Vitis vinifera VIT_15s0021g02690 I 0.000
VIT_11s0016g00380 Vitis vinifera VIT_11s0016g00380 I 0.000
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.000