CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_1002057
(
Arabidopsis lyrata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
fgenesh1_pg.C_scaffold_1002057
T039081_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_1002057
bHLH
113
164
QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE
Links
Other
bHLH
family TFs
Other
Arabidopsis lyrata
TFs
459 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_002620
Albugo laibachii
ALNC14_002620
N
ALNC14_007910
Albugo laibachii
ALNC14_007910
N
estExt_fgenesh1_kg.C_30679
Phytophthora capsici
estExt_fgenesh1_kg.C_30679
N
F443_11438
Phytophthora parasitica
F443_11438
N
fgenesh_masked-piw_contig_734-abinit-gene-0.27
Pythium iwayamai
fgenesh_masked-piw_contig_734-abinit-gene-0.27
N
fgenesh_scip_prom.28083.10384
Phytophthora lateralis
fgenesh_scip_prom.28083.10384
N
fgenesh_scip_prom.46568.9134
Phytophthora kernoviae
fgenesh_scip_prom.46568.9134
N
maker-pag1_scaffold_164-snap-gene-0.30
Pythium aphanidermatum
maker-pag1_scaffold_164-snap-gene-0.30
N
Phyra85012
Phytophthora ramorum
Phyra85012
N
Physo134946
Phytophthora sojae
Physo134946
N
PITG_03670
Phytophthora infestans
PITG_03670
N
PYU1_G007030
Pythium ultimum
PYU1_G007030
N
SPRG_15751
Saprolegnia parasitica
SPRG_15751
N