CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr8G32130_001
(
Musa acuminata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GSMUA_Achr8G32130_001
T040219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.858
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P32130_001
bHLH
348
398
ATHPRSIAERERRTRISKRLRKLQDIVPNMDKQTSTSDMLELAIQHIKELQ
Links
Other
bHLH
family TFs
Other
Musa acuminata
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00010p00229220
Amborella trichopoda
AMTR_s00010p00229220
N
0.000
Ciclev10003120m.g
Citrus clementina
Ciclev10003120m.g
N
0.000
Cucsa.274650
Cucumis sativus
Cucsa.274650
N
0.000
evm.TU.supercontig_1782.2
Carica papaya
evm.TU.supercontig_1782.2
N
0.000
gene31321-v1.0-hybrid
Fragaria vesca
gene31321-v1.0-hybrid
N
0.000
Gorai.010G045600
Gossypium raimondii
Gorai.010G045600
N
0.000
MDP0000250947
Malus domestica
MDP0000250947
N
0.000
orange1.1g045277m.g
Citrus sinensis
orange1.1g045277m.g
N
0.000
Pm019140
Prunus mume
Pm019140
N
0.000
POPTR_0002s09140
Populus trichocarpa
POPTR_0002s09140
I
0.000
PRUPE_ppa024363mg
Prunus persica
PRUPE_ppa024363mg
N
0.000
SapurV1A.0331s0170
Salix purpurea
SapurV1A.0331s0170
N
0.000
TCM_034992
Theobroma cacao
TCM_034992
I
0.000