Afo_R003542 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R003542 T046569_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFEC
M02778_2.00 		Homo sapiens
RNCACRTGAB
VTCAYGTGNY		 SELEX
Jolma et al.(2013)
TFEC_1 		0.914 1.000
TFEC
M04078_2.00 		Homo sapiens
NVCACGTGACN
NGTCACGTGBN		 SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX 		0.914 1.000
TFEC
M04079_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX 		0.914 1.000
Tfec
M00755_2.00 		Mus musculus
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2013)
pTH2885 		0.914 0.981
Tfec
M01736_2.00 		Mus musculus
NCNCRTGVYN
NRBCAYGNGN		 PBM
Weirauch et al.(2014)
pTH5065 		0.914 0.981
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.870 0.907
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.870 0.907
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.870 0.907
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.870 0.907
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.870 0.907
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.870 0.907
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.870 0.907
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.870 0.889
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.870 0.889
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.870 0.889
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.870 0.889
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R003542 bHLH 174 227

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002066 Calypte anna Aan_R002066 I 0.914
Aan_R007225 Calypte anna Aan_R007225 I 0.870
Afo_R011673 Aptenodytes forsteri Afo_R011673 I 0.870
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I 0.870
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I 0.870
Brh_R009446 Buceros rhinoceros Brh_R009446 I 0.870
Brh_R012392 Buceros rhinoceros Brh_R012392 I 0.914
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I 0.870
ENSAMEG00000018238 Ailuropoda melanoleuca ENSAMEG00000018238 I 0.914
ENSAMXG00000021026 Astyanax mexicanus ENSAMXG00000021026 I 0.914
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I 0.870
ENSAPLG00000012143 Anas platyrhynchos ENSAPLG00000012143 I 0.914
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I 0.870
ENSCSAG00000010942 Chlorocebus sabaeus ENSCSAG00000010942 I 0.914
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I 0.870
ENSDNOG00000045240 Dasypus novemcinctus ENSDNOG00000045240 I 0.914
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I 0.870
ENSFALG00000010129 Ficedula albicollis ENSFALG00000010129 I 0.914
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I 0.870
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I 0.870
ENSGALG00000009411 Gallus gallus ENSGALG00000009411 I 0.914
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I 0.870
ENSGMOG00000009209 Gadus morhua ENSGMOG00000009209 I 0.914
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I 0.870
ENSLACG00000008018 Latimeria chalumnae ENSLACG00000008018 I 0.884
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I 0.870
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I 0.870
ENSLOCG00000015941 Lepisosteus oculatus ENSLOCG00000015941 I 0.914
ENSMEUG00000009307 Macropus eugenii ENSMEUG00000009307 I 0.914
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I 0.870
ENSMMUG00000016347 Macaca mulatta ENSMMUG00000016347 I 0.914
ENSMODG00000015845 Monodelphis domestica ENSMODG00000015845 I 0.914
ENSMPUG00000007248 Mustela putorius furo ENSMPUG00000007248 I 0.914
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I 0.870
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I 0.870
ENSNLEG00000011480 Nomascus leucogenys ENSNLEG00000011480 I 0.914
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I 0.870
ENSOARG00000001668 Ovis aries ENSOARG00000001668 I 0.914
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I 0.870
ENSONIG00000016803 Oreochromis niloticus ENSONIG00000016803 I 0.914
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I 0.870
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I 0.870
ENSP00000265440 Macaca fascicularis ENSP00000265440 I 0.914
ENSP00000265440-D1 Bos grunniens ENSP00000265440-D1 I 0.914
ENSP00000391803 Macaca fascicularis ENSP00000391803 I 0.870
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I 0.870
ENSPANG00000022367 Papio anubis ENSPANG00000022367 I 0.914
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I 0.870
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I 0.870
ENSPFOG00000014522 Poecilia formosa ENSPFOG00000014522 I 0.914
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I 0.870
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I 0.870
ENSPPYG00000017928 Pongo abelii ENSPPYG00000017928 I 0.914
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I 0.870
ENSPSIG00000015144 Pelodiscus sinensis ENSPSIG00000015144 I 0.914
ENSSHAG00000012198 Sarcophilus harrisii ENSSHAG00000012198 I 0.914
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I 0.870
ENSSSCG00000016637 Sus scrofa ENSSSCG00000016637 I 0.914
ENSSTOG00000001224 Ictidomys tridecemlineatus ENSSTOG00000001224 I 0.914
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I 0.870
ENSTSYG00000008234 Tarsius syrichta ENSTSYG00000008234 I 0.914
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I 0.870
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I 0.870
ENSXMAG00000009146 Xiphophorus maculatus ENSXMAG00000009146 I 0.914
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I 0.870
Gfo_R005766 Geospiza fortis Gfo_R005766 I 0.914
Gfo_R014572 Geospiza fortis Gfo_R014572 I 0.870
MITF Anolis carolinensis ENSACAG00000013586 I 0.870
MITF Bos taurus ENSBTAG00000006679 I 0.870
MITF Canis familiaris ENSCAFG00000006496 I 0.870
MITF Callithrix jacchus ENSCJAG00000013260 I 0.870
MITF Cavia porcellus ENSCPOG00000014963 I 0.870
MITF Dasypus novemcinctus ENSDNOG00000037006 I 0.870
Mitf Dipodomys ordii ENSDORG00000003336 I 0.870
MITF Equus caballus ENSECAG00000005360 I 0.870
MITF Erinaceus europaeus ENSEEUG00000005163 I 0.870
MITF Felis catus ENSFCAG00000024419 I 0.870
MITF Homo sapiens ENSG00000187098 D 0.870
MITF Gorilla gorilla ENSGGOG00000024338 I 0.870
MITF Loxodonta africana ENSLAFG00000023153 I 0.870
MITF Meleagris gallopavo ENSMGAG00000009507 I 0.870
MITF Myotis lucifugus ENSMLUG00000002587 I 0.870
MITF Macaca mulatta ENSMMUG00000002100 I 0.870
MITF Monodelphis domestica ENSMODG00000003754 I 0.870
Mitf Mus musculus ENSMUSG00000035158 D 0.870
MITF Oryctolagus cuniculus ENSOCUG00000002190 I 0.870
MITF Otolemur garnettii ENSOGAG00000000043 I 0.870
MITF Pan troglodytes ENSPTRG00000015100 I 0.870
Mitf Rattus norvegicus ENSRNOG00000008658 I 0.870
MITF Sorex araneus ENSSARG00000002538 I 0.870
MITF Tupaia belangeri ENSTBEG00000017713 I 0.870
MITF Taeniopygia guttata ENSTGUG00000009847 I 0.870
MITF Tursiops truncatus ENSTTRG00000007072 I 0.870
mitf Xenopus tropicalis XB-GENE-484962 I 0.870
mitf.L Xenopus laevis XB-GENE-6252679 I 0.870
mitf.S Xenopus laevis XB-GENE-6464338 I 0.870
mitfa Danio rerio ENSDARG00000003732 I 0.870
mitfa Gasterosteus aculeatus ENSGACG00000011875 I 0.870
mitfa Oryzias latipes ENSORLG00000003123 I 0.870
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I 0.870
mitfa Takifugu rubripes ENSTRUG00000001600 I 0.870
mitfb Danio rerio ENSDARG00000037833 I 0.870
mitfb Gasterosteus aculeatus ENSGACG00000003425 I 0.870
mitfb Oryzias latipes ENSORLG00000013461 I 0.870
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I 0.870
mitfb Takifugu rubripes ENSTRUG00000012080 I 0.870
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I 0.870
Myotis_brandtii_TFEC_10018991 Myotis brandtii Myotis_brandtii_TFEC_10018991 I 0.871
Pvit_00330 Pogona vitticeps Pvit_00330 I 0.870
Pvit_01233 Pogona vitticeps Pvit_01233 I 0.870
Pvit_16445 Pogona vitticeps Pvit_16445 I 0.914
Tal_R000725 Tyto alba Tal_R000725 I 0.914
Tal_R001329 Tyto alba Tal_R001329 I 0.870
TFE3 Anolis carolinensis ENSACAG00000022140 I 0.870
TFE3 Cavia porcellus ENSCPOG00000012410 I 0.870
TFE3 Monodelphis domestica ENSMODG00000009925 I 0.857
Tfe3 Mus musculus ENSMUSG00000000134 D 0.870
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I 0.870
Tfe3 Rattus norvegicus ENSRNOG00000009605 I 0.870
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I 0.870
TFEC Anolis carolinensis ENSACAG00000006672 I 0.914
TFEC Bos taurus ENSBTAG00000014228 I 0.914
TFEC Canis familiaris ENSCAFG00000003397 I 0.914
TFEC Choloepus hoffmanni ENSCHOG00000001149 I 0.914
TFEC Callithrix jacchus ENSCJAG00000005199 I 0.914
TFEC Cavia porcellus ENSCPOG00000012369 I 0.914
tfec Danio rerio ENSDARG00000098745 I 0.914
Tfec Dipodomys ordii ENSDORG00000004403 I 0.914
TFEC Equus caballus ENSECAG00000013937 I 0.914
TFEC Felis catus ENSFCAG00000027627 I 0.914
TFEC Homo sapiens ENSG00000105967 D 0.914
tfec Gasterosteus aculeatus ENSGACG00000018910 I 0.914
TFEC Gorilla gorilla ENSGGOG00000009901 I 0.914
TFEC Loxodonta africana ENSLAFG00000017267 I 0.884
TFEC Meleagris gallopavo ENSMGAG00000008979 I 0.914
TFEC Microcebus murinus ENSMICG00000006995 I 0.914
TFEC Myotis lucifugus ENSMLUG00000008952 I 0.871
Tfec Mus musculus ENSMUSG00000029553 D 0.914
TFEC Ornithorhynchus anatinus ENSOANG00000014094 I 0.914
TFEC Oryctolagus cuniculus ENSOCUG00000006292 I 0.914
TFEC Otolemur garnettii ENSOGAG00000010066 I 0.914
tfec Oryzias latipes ENSORLG00000010461 I 0.914
TFEC Pan troglodytes ENSPTRG00000019610 I 0.914
Tfec Rattus norvegicus ENSRNOG00000061595 I 0.914
TFEC Taeniopygia guttata ENSTGUG00000005289 I 0.914
tfec Tetraodon nigroviridis ENSTNIG00000018518 I 0.914
TFEC Tursiops truncatus ENSTTRG00000005875 I 0.914
TFEC Vicugna pacos ENSVPAG00000005459 I 0.914