Cflo_05798--XP_001122645.1_APIME (Camponotus floridanus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cflo_05798--XP_001122645.1_APIME T046898_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAND2
M04150_2.00 		Homo sapiens
MACACCTGBD
HVCAGGTGTK		 SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX 		0.883 0.846
HAND2
M04151_2.00 		Homo sapiens
MACACCTGYD
HRCAGGTGTK		 SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX 		0.883 0.846
Hand
M05984_2.00 		Drosophila melanogaster
CASATGGCS
SGCCATSTG		 B1H
Zhu et al.(2011)
Hand_da_SANGER_5_FBgn0032209 		0.851 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_05798--XP_001122645.1_APIME bHLH 140 192

Links

Other bHLH family TFs
Other Camponotus floridanus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT3G07565 Arabidopsis thaliana AT3G07565 N
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N
Carubv10014434m.g Capsella rubella Carubv10014434m.g N
cassava11790.valid.m1 Manihot esculenta cassava11790.valid.m1 N
cassava11791.valid.m1 Manihot esculenta cassava11791.valid.m1 N
cassava11792.valid.m1 Manihot esculenta cassava11792.valid.m1 N
Ca_02700 Cicer arietinum Ca_02700 N
chr3.CM0106.670.nc Lotus japonicus chr3.CM0106.670.nc N
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N
gene17671-v1.0-hybrid Fragaria vesca gene17671-v1.0-hybrid N
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N
Lus10025581.g Linum usitatissimum Lus10025581.g N
Lus10025582.g Linum usitatissimum Lus10025582.g N
Lus10027045.g Linum usitatissimum Lus10027045.g N
MDP0000184998 Malus domestica MDP0000184998 N
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N
Pm007242 Prunus mume Pm007242 N
POPTR_0017s05170 Populus trichocarpa POPTR_0017s05170 N
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N
SapurV1A.0947s0070 Salix purpurea SapurV1A.0947s0070 N
SapurV1A.1186s0090 Salix purpurea SapurV1A.1186s0090 N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
TCM_019960 Theobroma cacao TCM_019960 N
TCM_019968 Theobroma cacao TCM_019968 N