cassava22865.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava22865.valid.m1 T048000_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.914 1.000
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.914 1.000
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.875 0.863
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.875 0.863
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.862 0.843
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.862 0.843
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.862 0.804
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.862 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.851 0.804
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.851 0.784
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.851 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22865.valid.m1 bHLH 97 147

Links

Other bHLH family TFs
Other Manihot esculenta TFs

874 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_04239 Beauveria bassiana BBA_04239 N
CCM_02268 Cordyceps militaris CCM_02268 N
CMQ_2129 Grosmannia clavigera CMQ_2129 N
FFUJ_00890 Fusarium fujikuroi FFUJ_00890 N
FOXG_00678 Fusarium oxysporum FOXG_00678 N
FPSE_00040 Fusarium pseudograminearum FPSE_00040 N
MAC_08800 Metarhizium acridum MAC_08800 N
MAJ_00880 Metarhizium majus MAJ_00880 N
MANI_001644 Metarhizium anisopliae MANI_001644 N
MBR_03227 Metarhizium brunneum MBR_03227 N
MGU_02969 Metarhizium guizhouense MGU_02969 N
S40285_00710 Stachybotrys chlorohalonata S40285_00710 N
SBOR_4994 Sclerotinia borealis SBOR_4994 N
TRIATDRAFT_321285 Trichoderma atroviride TRIATDRAFT_321285 N
TRIREDRAFT_57631 Trichoderma reesei TRIREDRAFT_57631 N
TRIVIDRAFT_1173 Trichoderma virens TRIVIDRAFT_1173 N
VDAG_07816 Verticillium dahliae VDAG_07816 N
VDBG_01430 Verticillium albo atrum VDBG_01430 N