cassava45968.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava45968.m1 T048101_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.860 0.615
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45968.m1 bHLH 64 116

Links

Other bHLH family TFs
Other Manihot esculenta TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
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Bra022149 Brassica rapa Bra022149 I
Ca_07908 Cicer arietinum Ca_07908 N
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I
Cla009202 Citrullus lanatus Cla009202 N
Cucsa.180580 Cucumis sativus Cucsa.180580 N
GLYMA09G01670 Glycine max GLYMA09G01670 N
GLYMA15G12591 Glycine max GLYMA15G12591 N
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I
MTR_2g026725 Medicago truncatula MTR_2g026725 I
OBART10G15720 Oryza barthii OBART10G15720 I
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I
PGSC0003DMG400013300 Solanum tuberosum PGSC0003DMG400013300 N
Solyc11g012720.1 Solanum lycopersicum Solyc11g012720.1 N
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I
VIT_00s0259g00210 Vitis vinifera VIT_00s0259g00210 N
VIT_00s0956g00030 Vitis vinifera VIT_00s0956g00030 N