Cucsa.061590 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.061590 T048137_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH80
M06722_2.00 		Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH80_col_a 		0.914 0.941
BHLH80
M06723_2.00 		Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH		 Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a 		0.914 0.941
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.873 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.061590.1 bHLH 175 225

Links

Other bHLH family TFs
Other Cucumis sativus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29634.m002156 Ricinus communis 29634.m002156 N 0.000
Aquca_010_00478 Aquilegia coerulea Aquca_010_00478 N 0.000
cassava18797.valid.m1 Manihot esculenta cassava18797.valid.m1 N 0.000
cassava35611.valid.m1 Manihot esculenta cassava35611.valid.m1 N 0.000
Cla014744 Citrullus lanatus Cla014744 N 0.000
evm.TU.supercontig_6.108 Carica papaya evm.TU.supercontig_6.108 N 0.000
gene14780-v1.0-hybrid Fragaria vesca gene14780-v1.0-hybrid N 0.000
Gorai.003G015400 Gossypium raimondii Gorai.003G015400 N 0.000
Gorai.008G068100 Gossypium raimondii Gorai.008G068100 N 0.000
Lus10041740.g Linum usitatissimum Lus10041740.g N 0.000
MDP0000575908 Malus domestica MDP0000575908 N 0.000
mgf021185m Mimulus guttatus mgf021185m N 0.000
PK13108.1 Cannabis sativa PK13108.1 N 0.000
Pm026616 Prunus mume Pm026616 N 0.000
POPTR_0005s12520 Populus trichocarpa POPTR_0005s12520 N 0.000
POPTR_0007s12760 Populus trichocarpa POPTR_0007s12760 N 0.000
PRUPE_ppa003124mg Prunus persica PRUPE_ppa003124mg N 0.000
SapurV1A.0254s0130 Salix purpurea SapurV1A.0254s0130 N 0.000
SapurV1A.1131s0040 Salix purpurea SapurV1A.1131s0040 N 0.000
SapurV1A.4211s0010 Salix purpurea SapurV1A.4211s0010 N 0.000
TCM_000399 Theobroma cacao TCM_000399 N 0.000