Cucsa.313090 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.313090 T048226_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.979
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.979
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.958
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.958
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.938
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.890 0.896
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.917
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.864 0.667
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.858 0.604
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.313090.1 bHLH 493 540

Links

Other bHLH family TFs
Other Cucumis sativus TFs

570 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001146 Calypte anna Aan_R001146 I
Aan_R004737 Calypte anna Aan_R004737 I
Aan_R013329 Calypte anna Aan_R013329 I
Afo_R005490 Aptenodytes forsteri Afo_R005490 I
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I
Brh_R004487 Buceros rhinoceros Brh_R004487 I
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I
ENSAMEG00000005830 Ailuropoda melanoleuca ENSAMEG00000005830 I
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I
ENSCSAG00000010713 Chlorocebus sabaeus ENSCSAG00000010713 I
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I
ENSLACG00000006381 Latimeria chalumnae ENSLACG00000006381 I
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I
ENSMPUG00000012619 Mustela putorius furo ENSMPUG00000012619 I
ENSNLEG00000002116 Nomascus leucogenys ENSNLEG00000002116 I
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I
ENSOARG00000000455 Ovis aries ENSOARG00000000455 I
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I
ENSONIG00000017642 Oreochromis niloticus ENSONIG00000017642 I
ENSP00000358437 Macaca fascicularis ENSP00000358437 I
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I
ENSP00000358677 Macaca fascicularis ENSP00000358677 I
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I
ENSP00000362390 Macaca fascicularis ENSP00000362390 I
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I
ENSPANG00000025094 Papio anubis ENSPANG00000025094 I
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I
ENSPFOG00000003081 Poecilia formosa ENSPFOG00000003081 I
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I
ENSPPYG00000020504 Pongo abelii ENSPPYG00000020504 I
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I
ENSSTOG00000003725 Ictidomys tridecemlineatus ENSSTOG00000003725 I
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I
ENSTSYG00000007267 Tarsius syrichta ENSTSYG00000007267 I
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I
GA19742 Drosophila pseudoobscura FBgn0079738 I
GD23341 Drosophila simulans FBgn0194727 I
GE25417 Drosophila yakuba FBgn0242487 I
GF14392 Drosophila ananassae FBgn0091419 I
Gfo_R005492 Geospiza fortis Gfo_R005492 I
GG25073 Drosophila erecta FBgn0117202 I
GI17986 Drosophila mojavensis FBgn0140726 I
GJ19568 Drosophila virilis FBgn0206710 I
GK15086 Drosophila willistoni FBgn0217091 I
GM18548 Drosophila sechellia FBgn0173455 I
LCUP000433 Lucilia cuprina LCUP000433 I
MDOA010319 Musca domestica MDOA010319 I
mid Drosophila melanogaster FBgn0261963 D
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I
Myotis_brandtii_Tbx22_10010932 Myotis brandtii Myotis_brandtii_Tbx22_10010932 I
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I
Ogr00863 Ophisaurus gracilis Ogr00863 I
Ogr03354 Ophisaurus gracilis Ogr03354 I
Ogr10944 Ophisaurus gracilis Ogr10944 I
Pvit_04496 Pogona vitticeps Pvit_04496 I
Pvit_09354 Pogona vitticeps Pvit_09354 I
Pvit_12384 Pogona vitticeps Pvit_12384 I
SNAPOd2T00017929001 Oikopleura dioica SNAPOd2T00017929001 I
Tal_R000620 Tyto alba Tal_R000620 I
TBX15 Anolis carolinensis ENSACAG00000008131 I
TBX15 Canis familiaris ENSCAFG00000009976 I
TBX15 Callithrix jacchus ENSCJAG00000005662 I
TBX15 Cavia porcellus ENSCPOG00000000615 I
tbx15 Danio rerio ENSDARG00000002582 I
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I
TBX15 Equus caballus ENSECAG00000023325 I
TBX15 Erinaceus europaeus ENSEEUG00000003919 I
TBX15 Felis catus ENSFCAG00000023731 I
TBX15 Homo sapiens ENSG00000092607 D
TBX15 Gorilla gorilla ENSGGOG00000013468 I
TBX15 Loxodonta africana ENSLAFG00000018452 I
TBX15 Meleagris gallopavo ENSMGAG00000014235 I
TBX15 Myotis lucifugus ENSMLUG00000002958 I
TBX15 Macaca mulatta ENSMMUG00000009257 I
TBX15 Monodelphis domestica ENSMODG00000005319 I
Tbx15 Mus musculus ENSMUSG00000027868 I
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I
TBX15 Otolemur garnettii ENSOGAG00000007282 I
TBX15 Ochotona princeps ENSOPRG00000004847 I
TBX15 Procavia capensis ENSPCAG00000016333 I
TBX15 Pan troglodytes ENSPTRG00000001172 I
TBX15 Pteropus vampyrus ENSPVAG00000015733 I
Tbx15 Rattus norvegicus ENSRNOG00000019565 I
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I
tbx15 Takifugu rubripes ENSTRUG00000003945 I
TBX15 Tursiops truncatus ENSTTRG00000011006 I
tbx15 Xenopus tropicalis XB-GENE-483924 I
TBX18 Anolis carolinensis ENSACAG00000003859 I
TBX18 Bos taurus ENSBTAG00000018161 I
TBX18 Canis familiaris ENSCAFG00000002987 I
TBX18 Callithrix jacchus ENSCJAG00000015218 I
tbx18 Danio rerio ENSDARG00000036930 I
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I
TBX18 Equus caballus ENSECAG00000005787 I
TBX18 Erinaceus europaeus ENSEEUG00000013766 I
TBX18 Echinops telfairi ENSETEG00000006457 I
TBX18 Felis catus ENSFCAG00000012657 I
TBX18 Homo sapiens ENSG00000112837 D
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I
TBX18 Gorilla gorilla ENSGGOG00000027982 I
TBX18 Loxodonta africana ENSLAFG00000015009 I
TBX18 Meleagris gallopavo ENSMGAG00000013715 I
TBX18 Myotis lucifugus ENSMLUG00000011326 I
TBX18 Macaca mulatta ENSMMUG00000010599 I
TBX18 Monodelphis domestica ENSMODG00000018361 I
Tbx18 Mus musculus ENSMUSG00000032419 I
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I
TBX18 Otolemur garnettii ENSOGAG00000004300 I
TBX18 Pan troglodytes ENSPTRG00000018390 I
TBX18 Pteropus vampyrus ENSPVAG00000016771 I
Tbx18 Rattus norvegicus ENSRNOG00000010685 I
TBX18 Sus scrofa ENSSSCG00000004290 I
TBX18 Tupaia belangeri ENSTBEG00000007925 I
TBX18 Taeniopygia guttata ENSTGUG00000012504 I
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I
tbx18 Takifugu rubripes ENSTRUG00000001419 I
TBX18 Tursiops truncatus ENSTTRG00000005713 I
TBX18 Vicugna pacos ENSVPAG00000006869 I
tbx18 Xenopus tropicalis XB-GENE-489907 I
TBX22 Bos taurus ENSBTAG00000048060 I
TBX22 Callithrix jacchus ENSCJAG00000009617 I
tbx22 Danio rerio ENSDARG00000091748 I
TBX22 Echinops telfairi ENSETEG00000006623 I
TBX22 Felis catus ENSFCAG00000002301 I
TBX22 Homo sapiens ENSG00000122145 D
TBX22 Gallus gallus ENSGALG00000004093 I
TBX22 Gorilla gorilla ENSGGOG00000008990 I
TBX22 Loxodonta africana ENSLAFG00000001881 I
TBX22 Meleagris gallopavo ENSMGAG00000001700 I
TBX22 Microcebus murinus ENSMICG00000009019 I
TBX22 Myotis lucifugus ENSMLUG00000016826 I
TBX22 Macaca mulatta ENSMMUG00000009102 I
TBX22 Monodelphis domestica ENSMODG00000004255 I
Tbx22 Mus musculus ENSMUSG00000031241 I
TBX22 Oryctolagus cuniculus ENSOCUG00000013685 I
TBX22 Otolemur garnettii ENSOGAG00000002759 I
TBX22 Pan troglodytes ENSPTRG00000022058 I
TBX22 Pteropus vampyrus ENSPVAG00000008832 I
Tbx22 Rattus norvegicus ENSRNOG00000002346 I
TBX22 Sus scrofa ENSSSCG00000012449 I
TBX22 Tupaia belangeri ENSTBEG00000010144 I
TBX22 Taeniopygia guttata ENSTGUG00000002573 I
TBX22 Takifugu rubripes ENSTRUG00000010801 I
TBX22 Tursiops truncatus ENSTTRG00000014058 I
TBX22 Vicugna pacos ENSVPAG00000011942 I
tbx22 Xenopus tropicalis XB-GENE-994522 I