estExt_fgenesh2_kg.C_7600001 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_kg.C_7600001 T048371_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROG2
M02799_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
NEUROG2_1 		0.842 0.865
NEUROG2
M02800_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
NEUROG2_2 		0.842 0.865
NEUROG2
M04179_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX 		0.842 0.865
NEUROG2
M04181_2.00 		Homo sapiens
RVCATRTGBY
RVCAYATGBY		 SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX 		0.842 0.865
Neurog2
M08758_2.00 		Mus musculus
VBRRCAGATGGB
VCCATCTGYYVB		 Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C 		0.842 0.865
NEUROG2
M09879_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NGN2_Q3 		0.842 0.865
NEUROG2
M04180_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX 		0.842 0.865
NEUROG2
M04182_2.00 		Homo sapiens
RMCRTRTGYY
RRCAYAYGKY		 SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX 		0.842 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_7600001 bHLH 124 176

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000011639 Chlorocebus sabaeus ENSCSAG00000011639 N
ENSNLEG00000018129 Nomascus leucogenys ENSNLEG00000018129 N
ENSP00000412363 Macaca fascicularis ENSP00000412363 N
ENSPANG00000022917 Papio anubis ENSPANG00000022917 N
ENSPPYG00000002187 Pongo abelii ENSPPYG00000002187 N
ENSSTOG00000025609 Ictidomys tridecemlineatus ENSSTOG00000025609 N
ENSTSYG00000009341 Tarsius syrichta ENSTSYG00000009341 N
ZNF438 Canis familiaris ENSCAFG00000004017 N
ZNF438 Callithrix jacchus ENSCJAG00000013316 N
ZNF438 Cavia porcellus ENSCPOG00000000531 N
ZNF438 Homo sapiens ENSG00000183621 N
ZNF438 Gorilla gorilla ENSGGOG00000002677 N
ZNF438 Macaca mulatta ENSMMUG00000007864 N
ZNF438 Pteropus vampyrus ENSPVAG00000006292 N