CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.12__29
(
Phycomyces blakesleeanus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
fgeneshPB_pg.12__29
T048635_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.12__29
bHLH
488
539
LRVSHKLAERKRRKEMKELFDELRDSLPVEKNLKTSKWEILSKAVEYIAQLK
Links
Other
bHLH
family TFs
Other
Phycomyces blakesleeanus
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATGRP2B
Arabidopsis lyrata
fgenesh2_kg.4__14__AT2G21060.1
I
Bo2g119240
Brassica oleracea
Bo2g119240
I
Bo4g145670
Brassica oleracea
Bo4g145670
I
Bo7g049880
Brassica oleracea
Bo7g049880
I
Bo8g102040
Brassica oleracea
Bo8g102040
I
Bostr.25542s0051
Boechera stricta
Bostr.25542s0051
I
Bra030325
Brassica rapa
Bra030325
I
Bra031159
Brassica rapa
Bra031159
I
Cagra.2961s0009
Capsella grandiflora
Cagra.2961s0009
I
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
CSP2
Arabidopsis thaliana
AT4G38680
I
CSP4
Arabidopsis thaliana
AT2G21060
D
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
Gorai.002G195000
Gossypium raimondii
Gorai.002G195000
I
Gorai.002G195100
Gossypium raimondii
Gorai.002G195100
I
Gorai.005G253200
Gossypium raimondii
Gorai.005G253200
I
GRP2
Arabidopsis lyrata
scaffold_700059.1
I
Lus10005066.g
Linum usitatissimum
Lus10005066.g
N
Lus10027839.g
Linum usitatissimum
Lus10027839.g
N
Lus10034487.g
Linum usitatissimum
Lus10034487.g
I
mgf015980m
Mimulus guttatus
mgf015980m
I
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
PK26692.1
Cannabis sativa
PK26692.1
I
Pm020837
Prunus mume
Pm020837
I
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I