Carubv10001567m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10001567m.g T049330_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.914 1.000
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.843 0.490
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.843 0.531
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.843 0.531
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.843 0.531
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.843 0.531
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.843 0.490
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.843 0.490
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.843 0.490
PIF3
M00854_2.00 		Arabidopsis thaliana
CACGTGSNN
NNSCACGTG		 PBM
Franco-Zorrilla et al.(2014)
PIF3 		0.840 0.673
PIF3
M00722_2.00 		Arabidopsis thaliana
NCACRTN
NAYGTGN		 PBM
Chang et al.(2013)
pTH8200 		0.840 0.673
PK05451.1
M01120_2.00 		Cannabis sativa
YCACGTGM
KCACGTGR		 PBM
Lambert et al.(2019)
pTH10100 		0.840 0.673
PIF3
M08045_2.00 		Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD		 ChIP-seq
Mathelier et al.(2014)
MA0560.1 		0.840 0.673
PIF3
M09780_2.00 		Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV		 Transfac
Matys et al.(2006)
P$PIF3_01 		0.840 0.673
PIF3
M09781_2.00 		Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH		 Transfac
Matys et al.(2006)
P$PIF3_02 		0.840 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001567m bHLH 112 160

Links

Other bHLH family TFs
Other Capsella rubella TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_000030 Trichomonas vaginalis TVAG_000030 N
TVAG_001330 Trichomonas vaginalis TVAG_001330 N
TVAG_007040 Trichomonas vaginalis TVAG_007040 N
TVAG_008440 Trichomonas vaginalis TVAG_008440 N
TVAG_009880 Trichomonas vaginalis TVAG_009880 N
TVAG_011920 Trichomonas vaginalis TVAG_011920 N
TVAG_012150 Trichomonas vaginalis TVAG_012150 N
TVAG_015720 Trichomonas vaginalis TVAG_015720 N
TVAG_018850 Trichomonas vaginalis TVAG_018850 N
TVAG_019920 Trichomonas vaginalis TVAG_019920 N
TVAG_020730 Trichomonas vaginalis TVAG_020730 N
TVAG_023760 Trichomonas vaginalis TVAG_023760 N
TVAG_031600 Trichomonas vaginalis TVAG_031600 N
TVAG_032030 Trichomonas vaginalis TVAG_032030 N
TVAG_034280 Trichomonas vaginalis TVAG_034280 N
TVAG_037740 Trichomonas vaginalis TVAG_037740 N
TVAG_039390 Trichomonas vaginalis TVAG_039390 N
TVAG_039550 Trichomonas vaginalis TVAG_039550 N
TVAG_043230 Trichomonas vaginalis TVAG_043230 N
TVAG_059800 Trichomonas vaginalis TVAG_059800 N
TVAG_061750 Trichomonas vaginalis TVAG_061750 N
TVAG_063960 Trichomonas vaginalis TVAG_063960 N
TVAG_069660 Trichomonas vaginalis TVAG_069660 N
TVAG_073020 Trichomonas vaginalis TVAG_073020 N
TVAG_074110 Trichomonas vaginalis TVAG_074110 N
TVAG_078240 Trichomonas vaginalis TVAG_078240 N
TVAG_078430 Trichomonas vaginalis TVAG_078430 N
TVAG_084650 Trichomonas vaginalis TVAG_084650 N
TVAG_085930 Trichomonas vaginalis TVAG_085930 N
TVAG_086370 Trichomonas vaginalis TVAG_086370 N
TVAG_086900 Trichomonas vaginalis TVAG_086900 N
TVAG_089480 Trichomonas vaginalis TVAG_089480 N
TVAG_091390 Trichomonas vaginalis TVAG_091390 N
TVAG_093130 Trichomonas vaginalis TVAG_093130 N
TVAG_096910 Trichomonas vaginalis TVAG_096910 N
TVAG_100210 Trichomonas vaginalis TVAG_100210 N
TVAG_104600 Trichomonas vaginalis TVAG_104600 N
TVAG_106270 Trichomonas vaginalis TVAG_106270 N
TVAG_123760 Trichomonas vaginalis TVAG_123760 N
TVAG_127100 Trichomonas vaginalis TVAG_127100 N
TVAG_131670 Trichomonas vaginalis TVAG_131670 N
TVAG_131940 Trichomonas vaginalis TVAG_131940 N
TVAG_132110 Trichomonas vaginalis TVAG_132110 N
TVAG_132840 Trichomonas vaginalis TVAG_132840 N
TVAG_133550 Trichomonas vaginalis TVAG_133550 N
TVAG_135590 Trichomonas vaginalis TVAG_135590 N
TVAG_135820 Trichomonas vaginalis TVAG_135820 N
TVAG_142090 Trichomonas vaginalis TVAG_142090 N
TVAG_144220 Trichomonas vaginalis TVAG_144220 N
TVAG_144940 Trichomonas vaginalis TVAG_144940 N
TVAG_147450 Trichomonas vaginalis TVAG_147450 N
TVAG_148150 Trichomonas vaginalis TVAG_148150 N
TVAG_152980 Trichomonas vaginalis TVAG_152980 N
TVAG_161880 Trichomonas vaginalis TVAG_161880 N
TVAG_163090 Trichomonas vaginalis TVAG_163090 N
TVAG_165780 Trichomonas vaginalis TVAG_165780 N
TVAG_165880 Trichomonas vaginalis TVAG_165880 N
TVAG_165930 Trichomonas vaginalis TVAG_165930 N
TVAG_169420 Trichomonas vaginalis TVAG_169420 N
TVAG_173550 Trichomonas vaginalis TVAG_173550 N
TVAG_175140 Trichomonas vaginalis TVAG_175140 N
TVAG_176820 Trichomonas vaginalis TVAG_176820 N
TVAG_178970 Trichomonas vaginalis TVAG_178970 N
TVAG_180740 Trichomonas vaginalis TVAG_180740 N
TVAG_189330 Trichomonas vaginalis TVAG_189330 N
TVAG_189910 Trichomonas vaginalis TVAG_189910 N
TVAG_192190 Trichomonas vaginalis TVAG_192190 N
TVAG_193830 Trichomonas vaginalis TVAG_193830 N
TVAG_195150 Trichomonas vaginalis TVAG_195150 N
TVAG_196040 Trichomonas vaginalis TVAG_196040 N
TVAG_196090 Trichomonas vaginalis TVAG_196090 N
TVAG_197560 Trichomonas vaginalis TVAG_197560 N
TVAG_202380 Trichomonas vaginalis TVAG_202380 N
TVAG_209740 Trichomonas vaginalis TVAG_209740 N
TVAG_212170 Trichomonas vaginalis TVAG_212170 N
TVAG_213940 Trichomonas vaginalis TVAG_213940 N
TVAG_218340 Trichomonas vaginalis TVAG_218340 N
TVAG_218910 Trichomonas vaginalis TVAG_218910 N
TVAG_219060 Trichomonas vaginalis TVAG_219060 N
TVAG_220700 Trichomonas vaginalis TVAG_220700 N
TVAG_223910 Trichomonas vaginalis TVAG_223910 N
TVAG_229000 Trichomonas vaginalis TVAG_229000 N
TVAG_229790 Trichomonas vaginalis TVAG_229790 N
TVAG_231510 Trichomonas vaginalis TVAG_231510 N
TVAG_231960 Trichomonas vaginalis TVAG_231960 N
TVAG_233540 Trichomonas vaginalis TVAG_233540 N
TVAG_240890 Trichomonas vaginalis TVAG_240890 N
TVAG_247790 Trichomonas vaginalis TVAG_247790 N
TVAG_248770 Trichomonas vaginalis TVAG_248770 N
TVAG_253450 Trichomonas vaginalis TVAG_253450 N
TVAG_256950 Trichomonas vaginalis TVAG_256950 N
TVAG_263380 Trichomonas vaginalis TVAG_263380 N
TVAG_268540 Trichomonas vaginalis TVAG_268540 N
TVAG_268940 Trichomonas vaginalis TVAG_268940 N
TVAG_272290 Trichomonas vaginalis TVAG_272290 N
TVAG_279630 Trichomonas vaginalis TVAG_279630 N
TVAG_281270 Trichomonas vaginalis TVAG_281270 N
TVAG_283440 Trichomonas vaginalis TVAG_283440 N
TVAG_283940 Trichomonas vaginalis TVAG_283940 N
TVAG_294600 Trichomonas vaginalis TVAG_294600 N
TVAG_301510 Trichomonas vaginalis TVAG_301510 N
TVAG_303220 Trichomonas vaginalis TVAG_303220 N
TVAG_305200 Trichomonas vaginalis TVAG_305200 N
TVAG_307610 Trichomonas vaginalis TVAG_307610 N
TVAG_313480 Trichomonas vaginalis TVAG_313480 N
TVAG_313570 Trichomonas vaginalis TVAG_313570 N
TVAG_315480 Trichomonas vaginalis TVAG_315480 N
TVAG_317430 Trichomonas vaginalis TVAG_317430 N
TVAG_320380 Trichomonas vaginalis TVAG_320380 N
TVAG_320500 Trichomonas vaginalis TVAG_320500 N
TVAG_322370 Trichomonas vaginalis TVAG_322370 N
TVAG_323080 Trichomonas vaginalis TVAG_323080 N
TVAG_328710 Trichomonas vaginalis TVAG_328710 N
TVAG_336190 Trichomonas vaginalis TVAG_336190 N
TVAG_341450 Trichomonas vaginalis TVAG_341450 N
TVAG_344590 Trichomonas vaginalis TVAG_344590 N
TVAG_354160 Trichomonas vaginalis TVAG_354160 N
TVAG_357730 Trichomonas vaginalis TVAG_357730 N
TVAG_359600 Trichomonas vaginalis TVAG_359600 N
TVAG_362140 Trichomonas vaginalis TVAG_362140 N
TVAG_365310 Trichomonas vaginalis TVAG_365310 N
TVAG_366540 Trichomonas vaginalis TVAG_366540 N
TVAG_370110 Trichomonas vaginalis TVAG_370110 N
TVAG_370740 Trichomonas vaginalis TVAG_370740 N
TVAG_372400 Trichomonas vaginalis TVAG_372400 N
TVAG_373520 Trichomonas vaginalis TVAG_373520 N
TVAG_374610 Trichomonas vaginalis TVAG_374610 N
TVAG_378230 Trichomonas vaginalis TVAG_378230 N
TVAG_381540 Trichomonas vaginalis TVAG_381540 N
TVAG_392870 Trichomonas vaginalis TVAG_392870 N
TVAG_395590 Trichomonas vaginalis TVAG_395590 N
TVAG_395910 Trichomonas vaginalis TVAG_395910 N
TVAG_397540 Trichomonas vaginalis TVAG_397540 N
TVAG_400670 Trichomonas vaginalis TVAG_400670 N
TVAG_401500 Trichomonas vaginalis TVAG_401500 N
TVAG_408590 Trichomonas vaginalis TVAG_408590 N
TVAG_410580 Trichomonas vaginalis TVAG_410580 N
TVAG_413540 Trichomonas vaginalis TVAG_413540 N
TVAG_415170 Trichomonas vaginalis TVAG_415170 N
TVAG_419070 Trichomonas vaginalis TVAG_419070 N
TVAG_419450 Trichomonas vaginalis TVAG_419450 N
TVAG_420550 Trichomonas vaginalis TVAG_420550 N
TVAG_421910 Trichomonas vaginalis TVAG_421910 N
TVAG_424900 Trichomonas vaginalis TVAG_424900 N
TVAG_427750 Trichomonas vaginalis TVAG_427750 N
TVAG_428470 Trichomonas vaginalis TVAG_428470 N
TVAG_435140 Trichomonas vaginalis TVAG_435140 N
TVAG_438640 Trichomonas vaginalis TVAG_438640 N
TVAG_438980 Trichomonas vaginalis TVAG_438980 N
TVAG_441020 Trichomonas vaginalis TVAG_441020 N
TVAG_441880 Trichomonas vaginalis TVAG_441880 N
TVAG_442440 Trichomonas vaginalis TVAG_442440 N
TVAG_443820 Trichomonas vaginalis TVAG_443820 N
TVAG_449990 Trichomonas vaginalis TVAG_449990 N
TVAG_457960 Trichomonas vaginalis TVAG_457960 N
TVAG_465690 Trichomonas vaginalis TVAG_465690 N
TVAG_477840 Trichomonas vaginalis TVAG_477840 N
TVAG_481800 Trichomonas vaginalis TVAG_481800 N
TVAG_484870 Trichomonas vaginalis TVAG_484870 N
TVAG_486490 Trichomonas vaginalis TVAG_486490 N
TVAG_488260 Trichomonas vaginalis TVAG_488260 N
TVAG_488720 Trichomonas vaginalis TVAG_488720 N
TVAG_489030 Trichomonas vaginalis TVAG_489030 N
TVAG_493340 Trichomonas vaginalis TVAG_493340 N
TVAG_496890 Trichomonas vaginalis TVAG_496890 N
TVAG_496900 Trichomonas vaginalis TVAG_496900 N
TVAG_497700 Trichomonas vaginalis TVAG_497700 N
TVAG_500580 Trichomonas vaginalis TVAG_500580 N
TVAG_502960 Trichomonas vaginalis TVAG_502960 N
TVAG_503090 Trichomonas vaginalis TVAG_503090 N
TVAG_511510 Trichomonas vaginalis TVAG_511510 N
TVAG_513290 Trichomonas vaginalis TVAG_513290 N
TVAG_514890 Trichomonas vaginalis TVAG_514890 N
TVAG_516680 Trichomonas vaginalis TVAG_516680 N
TVAG_516790 Trichomonas vaginalis TVAG_516790 N
TVAG_516860 Trichomonas vaginalis TVAG_516860 N
TVAG_518840 Trichomonas vaginalis TVAG_518840 N
TVAG_530100 Trichomonas vaginalis TVAG_530100 N
TVAG_531720 Trichomonas vaginalis TVAG_531720 N
TVAG_532480 Trichomonas vaginalis TVAG_532480 N
TVAG_535670 Trichomonas vaginalis TVAG_535670 N
TVAG_542020 Trichomonas vaginalis TVAG_542020 N
TVAG_548520 Trichomonas vaginalis TVAG_548520 N
TVAG_551460 Trichomonas vaginalis TVAG_551460 N
TVAG_552010 Trichomonas vaginalis TVAG_552010 N
TVAG_555360 Trichomonas vaginalis TVAG_555360 N
TVAG_555720 Trichomonas vaginalis TVAG_555720 N
TVAG_557630 Trichomonas vaginalis TVAG_557630 N
TVAG_564540 Trichomonas vaginalis TVAG_564540 N
TVAG_564720 Trichomonas vaginalis TVAG_564720 N
TVAG_565070 Trichomonas vaginalis TVAG_565070 N
TVAG_565180 Trichomonas vaginalis TVAG_565180 N
TVAG_567350 Trichomonas vaginalis TVAG_567350 N
TVAG_567610 Trichomonas vaginalis TVAG_567610 N
TVAG_569770 Trichomonas vaginalis TVAG_569770 N
TVAG_569930 Trichomonas vaginalis TVAG_569930 N
TVAG_573210 Trichomonas vaginalis TVAG_573210 N
TVAG_579330 Trichomonas vaginalis TVAG_579330 N
TVAG_583180 Trichomonas vaginalis TVAG_583180 N
TVAG_591060 Trichomonas vaginalis TVAG_591060 N
TVAG_591850 Trichomonas vaginalis TVAG_591850 N
TVAG_593000 Trichomonas vaginalis TVAG_593000 N
TVAG_594390 Trichomonas vaginalis TVAG_594390 N
TVAG_595810 Trichomonas vaginalis TVAG_595810 N
TVAG_596090 Trichomonas vaginalis TVAG_596090 N
TVAG_598650 Trichomonas vaginalis TVAG_598650 N
TVAG_607240 Trichomonas vaginalis TVAG_607240 N