Ciclev10016289m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10016289m.g T049505_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.884 0.898
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10016289m bHLH 74 122

Links

Other bHLH family TFs
Other Citrus clementina TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005906 Calypte anna Aan_R005906 I
Afo_R013895 Aptenodytes forsteri Afo_R013895 I
Alligator_sinensis_CCG001426.1 Alligator sinensis Alligator_sinensis_CCG001426.1 I
Brh_R010359 Buceros rhinoceros Brh_R010359 I
Cmyd_10015325 Chelonia mydas Cmyd_10015325 I
ENSAMEG00000001186 Ailuropoda melanoleuca ENSAMEG00000001186 I
ENSAMXG00000001644 Astyanax mexicanus ENSAMXG00000001644 I
ENSAPLG00000016056 Anas platyrhynchos ENSAPLG00000016056 I
ENSBTAP00000008535-D1 Bos grunniens ENSBTAP00000008535-D1 I
ENSCSAG00000001118 Chlorocebus sabaeus ENSCSAG00000001118 I
ENSFALG00000000973 Ficedula albicollis ENSFALG00000000973 I
ENSGMOG00000015592 Gadus morhua ENSGMOG00000015592 I
ENSLOCG00000003310 Lepisosteus oculatus ENSLOCG00000003310 I
ENSMPUG00000014538 Mustela putorius furo ENSMPUG00000014538 I
ENSNLEG00000011682 Nomascus leucogenys ENSNLEG00000011682 I
ENSOARG00000019896 Ovis aries ENSOARG00000019896 I
ENSONIG00000016218 Oreochromis niloticus ENSONIG00000016218 I
ENSP00000362127 Macaca fascicularis ENSP00000362127 I
ENSPANG00000016211 Papio anubis ENSPANG00000016211 I
ENSPFOG00000013962 Poecilia formosa ENSPFOG00000013962 I
ENSPPYG00000001521 Pongo abelii ENSPPYG00000001521 I
ENSPSIG00000005687 Pelodiscus sinensis ENSPSIG00000005687 I
ENSSHAG00000014007 Sarcophilus harrisii ENSSHAG00000014007 I
ENSSTOG00000025276 Ictidomys tridecemlineatus ENSSTOG00000025276 I
ENSTSYG00000005589 Tarsius syrichta ENSTSYG00000005589 I
ENSXMAG00000014614 Xiphophorus maculatus ENSXMAG00000014614 I
Gfo_R001683 Geospiza fortis Gfo_R001683 I
LOC100909856 Rattus norvegicus ENSRNOG00000050240 I
MTF1 Taeniopygia guttata ENSTGUG00000001500 I
Mtf1 Rattus norvegicus ENSRNOG00000025724 I
MTF1 Tursiops truncatus ENSTTRG00000013535 I
MTF1 Pteropus vampyrus ENSPVAG00000010152 I
MTF1 Pan troglodytes ENSPTRG00000022932 I
mtf1 Xenopus tropicalis XB-GENE-979128 I
MTF1 Otolemur garnettii ENSOGAG00000000872 I
MTF1 Anolis carolinensis ENSACAG00000017181 I
MTF1 Bos taurus ENSBTAG00000006511 I
MTF1 Canis familiaris ENSCAFG00000003247 I
MTF1 Callithrix jacchus ENSCJAG00000002097 I
MTF1 Cavia porcellus ENSCPOG00000014657 I
MTF1 Dasypus novemcinctus ENSDNOG00000009118 I
MTF1 Equus caballus ENSECAG00000017235 I
MTF1 Echinops telfairi ENSETEG00000003045 I
MTF1 Felis catus ENSFCAG00000011020 I
MTF1 Homo sapiens ENSG00000188786 D
MTF1 Gasterosteus aculeatus ENSGACG00000013875 I
MTF1 Gorilla gorilla ENSGGOG00000007624 I
MTF1 Oryzias latipes ENSORLG00000014411 I
MTF1 Oryctolagus cuniculus ENSOCUG00000005389 I
MTF1 Ornithorhynchus anatinus ENSOANG00000002047 I
Mtf1 Mus musculus ENSMUSG00000028890 D
MTF1 Monodelphis domestica ENSMODG00000017745 I
MTF1 Macaca mulatta ENSMMUG00000023275 I
MTF1 Myotis lucifugus ENSMLUG00000000963 I
MTF1 Microcebus murinus ENSMICG00000011969 I
MTF1 Meleagris gallopavo ENSMGAG00000003052 I
MTF1 Gallus gallus ENSGALG00000001639 I
mtf1.L Xenopus laevis XB-GENE-979131 I
Myotis_brandtii_MTF1_10028927 Myotis brandtii Myotis_brandtii_MTF1_10028927 I
Ogr09934 Ophisaurus gracilis Ogr09934 I
Pvit_17763 Pogona vitticeps Pvit_17763 I
Tal_R009432 Tyto alba Tal_R009432 I
tetur01g09970 Tetranychus urticae tetur01g09970 I