Eucgr.E01043 (Eucalyptus grandis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Eucgr.E01043 T049624_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.857 0.800
BHLH14
M09785_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G00870_01 		0.854 0.720
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.849 0.620
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.846 0.780
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.846 0.780
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.846 0.760
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.846 0.760
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.846 0.760
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.846 0.720
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.843 0.520
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01043.1 bHLH 290 339

Links

Other bHLH family TFs
Other Eucalyptus grandis TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
0800010288 Ostreococcus tauri 0800010288 I
30147.m014015 Ricinus communis 30147.m014015 I
Aan_R005623 Calypte anna Aan_R005623 I
Aan_R006648 Calypte anna Aan_R006648 I
Afo_R006642 Aptenodytes forsteri Afo_R006642 I
Afo_R014077 Aptenodytes forsteri Afo_R014077 I
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I
Aqu1.219226 Amphimedon queenslandica Aqu1.219226 I
BGIBMGA007534 Bombyx mori BGIBMGA007534 I
BGIOSGA005653 Oryza indica BGIOSGA005653 I
BGIOSGA022619 Oryza indica BGIOSGA022619 I
Bo1g074680 Brassica oleracea Bo1g074680 I
Bo2g012280 Brassica oleracea Bo2g012280 I
Bo8g076700 Brassica oleracea Bo8g076700 I
Bostr.1460s0076 Boechera stricta Bostr.1460s0076 I
Bostr.18473s0137 Boechera stricta Bostr.18473s0137 I
Bostr.2902s0230 Boechera stricta Bostr.2902s0230 I
Bra023497 Brassica rapa Bra023497 I
Bra033767 Brassica rapa Bra033767 I
BRADI1G44520 Brachypodium distachyon BRADI1G44520 I
BRADI3G59740 Brachypodium distachyon BRADI3G59740 I
Brh_R005316 Buceros rhinoceros Brh_R005316 I
Brh_R011115 Buceros rhinoceros Brh_R011115 I
Cagra.1036s0060 Capsella grandiflora Cagra.1036s0060 I
Cagra.4239s0004 Capsella grandiflora Cagra.4239s0004 I
CAOG_00276 Capsaspora owczarzaki CAOG_00276 I
CapteG198117 Capitella teleta CapteG198117 I
Carubv10001291m.g Capsella rubella Carubv10001291m.g I
Carubv10018365m.g Capsella rubella Carubv10018365m.g I
cassava17583.valid.m1 Manihot esculenta cassava17583.valid.m1 I
cassava22158.valid.m1 Manihot esculenta cassava22158.valid.m1 I
CGI_10023548 Crassostrea gigas CGI_10023548 I
chr4.LjT30K03.50.nc Lotus japonicus chr4.LjT30K03.50.nc I
Ciclev10018041m.g Citrus clementina Ciclev10018041m.g I
CMT433C Cyanidioschyzon merolae CMT433C I
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I
Contig4079.0.g2 Oxytricha trifallax Contig4079.0.g2 I
Contig5499.0.g79 Oxytricha trifallax Contig5499.0.g79 I
Cucsa.098190 Cucumis sativus Cucsa.098190 I
Cucsa.197250 Cucumis sativus Cucsa.197250 I
DEL1 Arabidopsis lyrata fgenesh2_kg.5__1169__AT3G48160.2 I
DEL1 Vitis vinifera VIT_17s0000g07630 I
DEL2 Arabidopsis lyrata Al_scaffold_0006_1397 I
E2F7 Anolis carolinensis ENSACAG00000005414 I
E2F7 Bos taurus ENSBTAG00000016931 I
E2F7 Canis familiaris ENSCAFG00000005718 I
E2F7 Callithrix jacchus ENSCJAG00000019162 I
E2F7 Cavia porcellus ENSCPOG00000007375 I
e2f7 Danio rerio ENSDARG00000008986 I
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I
E2F7 Echinops telfairi ENSETEG00000014750 I
E2F7 Felis catus ENSFCAG00000010756 I
E2F7 Homo sapiens ENSG00000165891 D
e2f7 Gasterosteus aculeatus ENSGACG00000019468 I
E2F7 Gorilla gorilla ENSGGOG00000012645 I
E2F7 Loxodonta africana ENSLAFG00000017902 I
E2F7 Meleagris gallopavo ENSMGAG00000010943 I
E2F7 Myotis lucifugus ENSMLUG00000012116 I
E2F7 Macaca mulatta ENSMMUG00000022846 I
E2F7 Monodelphis domestica ENSMODG00000020465 I
E2f7 Mus musculus ENSMUSG00000020185 D
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I
E2F7 Otolemur garnettii ENSOGAG00000010821 I
E2F7 Ochotona princeps ENSOPRG00000001896 I
E2F7 Procavia capensis ENSPCAG00000000596 I
E2F7 Pan troglodytes ENSPTRG00000005245 I
E2F7 Pteropus vampyrus ENSPVAG00000000288 I
E2f7 Rattus norvegicus ENSRNOG00000026252 I
E2F7 Sorex araneus ENSSARG00000004122 I
E2F7 Sus scrofa ENSSSCG00000000950 I
E2F7 Tupaia belangeri ENSTBEG00000005417 I
E2F7 Taeniopygia guttata ENSTGUG00000007515 I
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I
e2f7 Takifugu rubripes ENSTRUG00000001843 I
E2F7 Tursiops truncatus ENSTTRG00000000110 I
E2F7 Vicugna pacos ENSVPAG00000011151 I
e2f7 Xenopus tropicalis XB-GENE-1018445 I
e2f7.L Xenopus laevis XB-GENE-1018449 I
E2F8 Anolis carolinensis ENSACAG00000015743 I
E2F8 Bos taurus ENSBTAG00000017446 I
E2F8 Canis familiaris ENSCAFG00000009431 I
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I
E2F8 Callithrix jacchus ENSCJAG00000006811 I
E2F8 Cavia porcellus ENSCPOG00000013766 I
e2f8 Danio rerio ENSDARG00000057323 I
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I
E2f8 Dipodomys ordii ENSDORG00000000040 I
E2F8 Equus caballus ENSECAG00000016457 I
E2F8 Erinaceus europaeus ENSEEUG00000011472 I
E2F8 Felis catus ENSFCAG00000010706 I
E2F8 Homo sapiens ENSG00000129173 D
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I
E2F8 Loxodonta africana ENSLAFG00000022713 I
E2F8 Meleagris gallopavo ENSMGAG00000002303 I
E2F8 Myotis lucifugus ENSMLUG00000015592 I
E2F8 Macaca mulatta ENSMMUG00000010853 I
E2F8 Monodelphis domestica ENSMODG00000009029 I
E2f8 Mus musculus ENSMUSG00000046179 I
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I
E2F8 Otolemur garnettii ENSOGAG00000005774 I
e2f8 Oryzias latipes ENSORLG00000000786 I
E2F8 Procavia capensis ENSPCAG00000003996 I
E2F8 Pan troglodytes ENSPTRG00000003435 I
E2F8 Pteropus vampyrus ENSPVAG00000012522 I
E2f8 Rattus norvegicus ENSRNOG00000022537 I
E2F8 Sus scrofa ENSSSCG00000013352 I
E2F8 Tupaia belangeri ENSTBEG00000005521 I
E2F8 Taeniopygia guttata ENSTGUG00000015857 I
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I
e2f8 Takifugu rubripes ENSTRUG00000015792 I
E2F8 Tursiops truncatus ENSTTRG00000005707 I
e2f8.L Xenopus laevis XB-GENE-1219153 I
E2FD Arabidopsis thaliana AT5G14960 D
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I
ENSP00000323246 Macaca fascicularis ENSP00000323246 I
ENSP00000379463 Macaca fascicularis ENSP00000379463 I
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I
estExt_fgenesh2_pg.C_30256 Monosiga brevicollis estExt_fgenesh2_pg.C_30256 I
EuGene.0000050713 Micromonas pusilla EuGene.0000050713 I
EuGene.0800010516 Micromonas sp RCC299 EuGene.0800010516 I
e_gw1.178.5.1 Phytophthora capsici e_gw1.178.5.1 I
F443_02115 Phytophthora parasitica F443_02115 I
fgenesh1_pg.scaffold_121000063 Physcomitrella patens fgenesh1_pg.scaffold_121000063 I
fgenesh1_pg.scaffold_172000049 Physcomitrella patens fgenesh1_pg.scaffold_172000049 I
fgenesh2_pg.scaffold_132000019 Physcomitrella patens fgenesh2_pg.scaffold_132000019 I
fgenesh2_pg.scaffold_288000044 Branchiostoma floridae fgenesh2_pg.scaffold_288000044 I
fgenesh_scip_prom.28083.1342 Phytophthora lateralis fgenesh_scip_prom.28083.1342 I
gene03312-v1.0-hybrid Fragaria vesca gene03312-v1.0-hybrid I
Gfo_R003950 Geospiza fortis Gfo_R003950 I
Gfo_R003976 Geospiza fortis Gfo_R003976 I
GLYMA05G01760 Glycine max GLYMA05G01760 I
GLYMA06G19843 Glycine max GLYMA06G19843 I
GLYMA17G10130 Glycine max GLYMA17G10130 I
Gorai.004G114000 Gossypium raimondii Gorai.004G114000 I
GRMZM2G378665 Zea mays GRMZM2G378665 I
GSPATT00001226001 Paramecium tetraurelia GSPATT00001226001 I
GSPATT00002803001 Paramecium tetraurelia GSPATT00002803001 I
GUITHDRAFT_133924 Guillardia theta GUITHDRAFT_133924 I
gw.270.22.1 Branchiostoma floridae gw.270.22.1 I
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I
HelroG187766 Helobdella robusta HelroG187766 I
ISCW021939 Ixodes scapularis ISCW021939 I
L798_00191 Zootermopsis nevadensis L798_00191 I
LotgiG168338 Lottia gigantea LotgiG168338 I
LPERR02G26130 Leersia perrieri LPERR02G26130 I
LPERR06G08240 Leersia perrieri LPERR06G08240 I
Lus10032439.g Linum usitatissimum Lus10032439.g I
Lus10039455.g Linum usitatissimum Lus10039455.g I
Lus10042941.g Linum usitatissimum Lus10042941.g I
maker-pve_contig_484-snap-gene-0.19 Pythium vexans maker-pve_contig_484-snap-gene-0.19 I
mgf007657m Mimulus guttatus mgf007657m I
MTR_4g106540 Medicago truncatula MTR_4g106540 I
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I
NV16280 Nasonia vitripennis NV16280 I
OB02G38920 Oryza brachyantha OB02G38920 I
OBART02G31930 Oryza barthii OBART02G31930 I
OBART06G09260 Oryza barthii OBART06G09260 I
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I
OGLUM06G09840 Oryza glumaepatula OGLUM06G09840 I
Ogr19156 Ophisaurus gracilis Ogr19156 I
OLONG_012839 Oryza longistaminata OLONG_012839 I
OLONG_014374 Oryza longistaminata OLONG_014374 I
OMERI02G30620 Oryza meridionalis OMERI02G30620 I
ONIVA06G05110 Oryza nivara ONIVA06G05110 I
ONIVA06G10700 Oryza nivara ONIVA06G10700 I
OPUNC02G29630 Oryza punctata OPUNC02G29630 I
OPUNC06G08860 Oryza punctata OPUNC06G08860 I
ORGLA02G0274600 Oryza glaberrima ORGLA02G0274600 I
ORGLA06G0087600 Oryza glaberrima ORGLA06G0087600 I
ORUFI02G33610 Oryza rufipogon ORUFI02G33610 I
ORUFI06G09470 Oryza rufipogon ORUFI06G09470 I
OS02G0739700 Oryza sativa OS02G0739700 I
OS06G0245900 Oryza sativa OS06G0245900 I
OSTLU_42726 Ostreococcus lucimarinus OSTLU_42726 I
Pavir.Da01202 Panicum virgatum Pavir.Da01202 I
PDK_20s1335201g002 Phoenix dactylifera PDK_20s1335201g002 I
PGSC0003DMG400001296 Solanum tuberosum PGSC0003DMG400001296 I
PGSC0003DMG402024469 Solanum tuberosum PGSC0003DMG402024469 I
Physo156920 Phytophthora sojae Physo156920 I
PITG_06416 Phytophthora infestans PITG_06416 I
Pm024664 Prunus mume Pm024664 I
POPTR_0012s07700 Populus trichocarpa POPTR_0012s07700 I
POPTR_0015s08160 Populus trichocarpa POPTR_0015s08160 I
Pvit_06409 Pogona vitticeps Pvit_06409 I
Pvit_10252 Pogona vitticeps Pvit_10252 I
Sakowv30003251m.g Saccoglossus kowalevskii Sakowv30003251m.g I
SapurV1A.0161s0320 Salix purpurea SapurV1A.0161s0320 I
Sb10g008800 Sorghum bicolor Sb10g008800 I
SELMODRAFT_421405 Selaginella moellendorffii SELMODRAFT_421405 I
SELMODRAFT_451530 Selaginella moellendorffii SELMODRAFT_451530 I
Si019635m.g Setaria italica Si019635m.g I
Solyc02g087310.2 Solanum lycopersicum Solyc02g087310.2 I
Solyc03g113760.2 Solanum lycopersicum Solyc03g113760.2 I
SPU_023346 Strongylocentrotus purpuratus SPU_023346 I
Tal_R000495 Tyto alba Tal_R000495 I
Tal_R008430 Tyto alba Tal_R008430 I
TCM_011971 Theobroma cacao TCM_011971 I
TCM_017926 Theobroma cacao TCM_017926 I
Thhalv10013977m.g Eutrema salsugineum Thhalv10013977m.g I
Traes_6DL_90C72AE92 Triticum aestivum Traes_6DL_90C72AE92 I
Traes_7BS_CCA195724 Triticum aestivum Traes_7BS_CCA195724 I
TRIUR3_05632 Triticum urartu TRIUR3_05632 I
TTHERM_00721610 Tetrahymena thermophila TTHERM_00721610 I
XP_002164164.1 Hydra magnipapillata XP_002164164.1 I
XP_002942881 Xenopus tropicalis XP_002942881 I