CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_30141.2
(
Carica papaya
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
evm.TU.contig_30141.2
T049717_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_30141.2
bHLH
32
81
KRVHKAEREKMKREHLNELFIELGNALELTQQNNGKASILCETSRLLKDL
Links
Other
bHLH
family TFs
Other
Carica papaya
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH47
Arabidopsis thaliana
AT3G47640
N
0.858
Bostr.18473s0193
Boechera stricta
Bostr.18473s0193
N
0.858
Cagra.1659s0007
Capsella grandiflora
Cagra.1659s0007
N
0.858
Carubv10017931m.g
Capsella rubella
Carubv10017931m.g
N
0.858
cassava17541.valid.m1
Manihot esculenta
cassava17541.valid.m1
N
0.844
Eucgr.B00470
Eucalyptus grandis
Eucgr.B00470
N
0.871
Gorai.007G036700
Gossypium raimondii
Gorai.007G036700
N
0.873
PK09009.1
Cannabis sativa
PK09009.1
N
0.841
Pm024772
Prunus mume
Pm024772
N
0.902
POPTR_0003s07200
Populus trichocarpa
POPTR_0003s07200
N
0.844
PRUPE_ppa010295mg
Prunus persica
PRUPE_ppa010295mg
N
0.902
PYE
Arabidopsis lyrata
fgenesh2_kg.5__1121__AT3G47640.1
N
0.858
Thhalv10010670m.g
Eutrema salsugineum
Thhalv10010670m.g
N
0.858