Pavir.J06936 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J06936 T050873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06936.1.p bHLH 28 70

Links

Other bHLH family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29032.m000021 Ricinus communis 29032.m000021 I
29813.m001479 Ricinus communis 29813.m001479 I
30169.m006343 Ricinus communis 30169.m006343 I
AC198937.4_FG005 Zea mays AC198937.4_FG005 I
AMTR_s00032p00126420 Amborella trichopoda AMTR_s00032p00126420 I
anac042 Arabidopsis lyrata fgenesh2_kg.4__2460__AT2G43000.1 I
anac042 Vitis vinifera VIT_12s0028g00860 I
anac094 Arabidopsis lyrata Al_scaffold_0007_3733 I
ANAC094 Arabidopsis thaliana AT5G39820 D
anac094 Vitis vinifera VIT_14s0108g00860 I
Aquca_002_00586 Aquilegia coerulea Aquca_002_00586 I
Aquca_006_00295 Aquilegia coerulea Aquca_006_00295 I
Aquca_026_00367 Aquilegia coerulea Aquca_026_00367 I
BGIOSGA009044 Oryza indica BGIOSGA009044 I
BGIOSGA028728 Oryza indica BGIOSGA028728 I
Bo3g036290 Brassica oleracea Bo3g036290 I
Bo4g018490 Brassica oleracea Bo4g018490 I
Bo4g192870 Brassica oleracea Bo4g192870 I
Bo5g045190 Brassica oleracea Bo5g045190 I
Bo6g064260 Brassica oleracea Bo6g064260 I
Bo6g109250 Brassica oleracea Bo6g109250 I
Bo8g076410 Brassica oleracea Bo8g076410 I
Bostr.10058s0013 Boechera stricta Bostr.10058s0013 I
Bostr.12659s0312 Boechera stricta Bostr.12659s0312 I
Bostr.25993s0479 Boechera stricta Bostr.25993s0479 I
Bra000282 Brassica rapa Bra000282 I
Bra004403 Brassica rapa Bra004403 I
Bra004736 Brassica rapa Bra004736 I
Bra016294 Brassica rapa Bra016294 I
Bra024677 Brassica rapa Bra024677 I
Bra028441 Brassica rapa Bra028441 I
Bra037743 Brassica rapa Bra037743 I
BRADI1G58057 Brachypodium distachyon BRADI1G58057 I
BRADI3G37067 Brachypodium distachyon BRADI3G37067 I
BRADI3G59380 Brachypodium distachyon BRADI3G59380 I
BRADI4G30177 Brachypodium distachyon BRADI4G30177 I
Cagra.0202s0012 Capsella grandiflora Cagra.0202s0012 I
Cagra.1150s0013 Capsella grandiflora Cagra.1150s0013 I
Cagra.5905s0003 Capsella grandiflora Cagra.5905s0003 I
Cagra.8367s0003 Capsella grandiflora Cagra.8367s0003 I
Carubv10006906m.g Capsella rubella Carubv10006906m.g I
Carubv10011253m.g Capsella rubella Carubv10011253m.g I
Carubv10021514m.g Capsella rubella Carubv10021514m.g I
Carubv10023730m.g Capsella rubella Carubv10023730m.g I
cassava20477.m1 Manihot esculenta cassava20477.m1 I
cassava21730.m1 Manihot esculenta cassava21730.m1 I
cassava34069.m1 Manihot esculenta cassava34069.m1 I
cassava38350.m1 Manihot esculenta cassava38350.m1 I
cassava39074.m1 Manihot esculenta cassava39074.m1 I
cassava45330.m1 Manihot esculenta cassava45330.m1 I
Ca_12660 Cicer arietinum Ca_12660 I
Ca_15236 Cicer arietinum Ca_15236 I
Ca_18749 Cicer arietinum Ca_18749 I
Ca_26322 Cicer arietinum Ca_26322 I
chr2.LjT04L10.100.nc Lotus japonicus chr2.LjT04L10.100.nc I
chr3.CM0176.150.nc Lotus japonicus chr3.CM0176.150.nc I
Ciclev10005465m.g Citrus clementina Ciclev10005465m.g I
Ciclev10006695m.g Citrus clementina Ciclev10006695m.g I
Ciclev10011891m.g Citrus clementina Ciclev10011891m.g I
Ciclev10031623m.g Citrus clementina Ciclev10031623m.g I
Ciclev10032203m.g Citrus clementina Ciclev10032203m.g I
Cla003401 Citrullus lanatus Cla003401 I
Cla005599 Citrullus lanatus Cla005599 I
Cla010347 Citrullus lanatus Cla010347 I
Cla013684 Citrullus lanatus Cla013684 I
Cla023594 Citrullus lanatus Cla023594 I
CM1835.10.nc Lotus japonicus CM1835.10.nc I
Cucsa.118320 Cucumis sativus Cucsa.118320 I
Cucsa.239650 Cucumis sativus Cucsa.239650 N
Cucsa.265620 Cucumis sativus Cucsa.265620 I
Cucsa.285120 Cucumis sativus Cucsa.285120 I
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I
Eucgr.G02506 Eucalyptus grandis Eucgr.G02506 I
Eucgr.I01940 Eucalyptus grandis Eucgr.I01940 I
Eucgr.K01228 Eucalyptus grandis Eucgr.K01228 I
evm.TU.supercontig_128.20 Carica papaya evm.TU.supercontig_128.20 I
F775_01324 Aegilops tauschii F775_01324 I
F775_04018 Aegilops tauschii F775_04018 I
F775_22220 Aegilops tauschii F775_22220 I
F775_23219 Aegilops tauschii F775_23219 I
FEZ Arabidopsis thaliana AT1G26870 I
FEZ Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002274 I
gene03833-v1.0-hybrid Fragaria vesca gene03833-v1.0-hybrid I
gene30051-v1.0-hybrid Fragaria vesca gene30051-v1.0-hybrid N
GLYMA01G05680 Glycine max GLYMA01G05680 I
GLYMA02G11900 Glycine max GLYMA02G11900 I
GLYMA02G45371 Glycine max GLYMA02G45371 I
GLYMA08G41260 Glycine max GLYMA08G41260 I
GLYMA08G41995 Glycine max GLYMA08G41995 I
GLYMA13G05350 Glycine max GLYMA13G05350 I
GLYMA14G03441 Glycine max GLYMA14G03441 I
GLYMA15G40950 Glycine max GLYMA15G40950 I
GLYMA18G13574 Glycine max GLYMA18G13574 I
GLYMA18G15020 Glycine max GLYMA18G15020 I
GLYMA19G02580 Glycine max GLYMA19G02580 I
Gorai.001G091900 Gossypium raimondii Gorai.001G091900 I
Gorai.002G036700 Gossypium raimondii Gorai.002G036700 I
Gorai.004G270200 Gossypium raimondii Gorai.004G270200 N
Gorai.004G270300 Gossypium raimondii Gorai.004G270300 I
Gorai.004G270400 Gossypium raimondii Gorai.004G270400 I
Gorai.005G141200 Gossypium raimondii Gorai.005G141200 I
Gorai.006G017700 Gossypium raimondii Gorai.006G017700 I
Gorai.009G357700 Gossypium raimondii Gorai.009G357700 I
Gorai.012G054800 Gossypium raimondii Gorai.012G054800 I
Gorai.013G085000 Gossypium raimondii Gorai.013G085000 I
GRMZM2G100593 Zea mays GRMZM2G100593 I
GRMZM2G112548 Zea mays GRMZM2G112548 I
GRMZM2G152543 Zea mays GRMZM2G152543 I
GRMZM2G159094 Zea mays GRMZM2G159094 I
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I
GSMUA_Achr10G08420_001 Musa acuminata GSMUA_Achr10G08420_001 N
GSMUA_Achr5G02170_001 Musa acuminata GSMUA_Achr5G02170_001 I
GSMUA_Achr6G02680_001 Musa acuminata GSMUA_Achr6G02680_001 I
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I
GSMUA_Achr7G00860_001 Musa acuminata GSMUA_Achr7G00860_001 I
JUB1 Arabidopsis thaliana AT2G43000 D
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I
LjT46I09.50.nd Lotus japonicus LjT46I09.50.nd I
LPERR02G26510 Leersia perrieri LPERR02G26510 I
LPERR03G30390 Leersia perrieri LPERR03G30390 I
LPERR08G13170 Leersia perrieri LPERR08G13170 I
Lus10007263.g Linum usitatissimum Lus10007263.g I
Lus10015367.g Linum usitatissimum Lus10015367.g I
Lus10030478.g Linum usitatissimum Lus10030478.g I
Lus10031189.g Linum usitatissimum Lus10031189.g I
Lus10031767.g Linum usitatissimum Lus10031767.g I
Lus10036749.g Linum usitatissimum Lus10036749.g I
Lus10037178.g Linum usitatissimum Lus10037178.g I
MDP0000186765 Malus domestica MDP0000186765 I
MDP0000241821 Malus domestica MDP0000241821 I
MDP0000428265 Malus domestica MDP0000428265 I
mgf019629m Mimulus guttatus mgf019629m N
mgf023960m Mimulus guttatus mgf023960m I
mgf025649m Mimulus guttatus mgf025649m I
MLOC_60079 Hordeum vulgare MLOC_60079 I
MTR_5g040420 Medicago truncatula MTR_5g040420 I
MTR_5g090970 Medicago truncatula MTR_5g090970 I
MTR_6g011860 Medicago truncatula MTR_6g011860 I
MTR_8g467490 Medicago truncatula MTR_8g467490 I
OB02G39340 Oryza brachyantha OB02G39340 I
OB03G42970 Oryza brachyantha OB03G42970 I
OB08G23420 Oryza brachyantha OB08G23420 I
OBART02G32360 Oryza barthii OBART02G32360 I
OBART03G36060 Oryza barthii OBART03G36060 I
OBART08G15880 Oryza barthii OBART08G15880 I
OGLUM02G33000 Oryza glumaepatula OGLUM02G33000 I
OGLUM03G35790 Oryza glumaepatula OGLUM03G35790 I
OGLUM08G16650 Oryza glumaepatula OGLUM08G16650 I
OLONG_016322 Oryza longistaminata OLONG_016322 I
OMERI02G31030 Oryza meridionalis OMERI02G31030 I
OMERI03G33230 Oryza meridionalis OMERI03G33230 I
OMERI08G13180 Oryza meridionalis OMERI08G13180 I
ONIVA06G04660 Oryza nivara ONIVA06G04660 I
ONIVA08G17120 Oryza nivara ONIVA08G17120 I
OPUNC02G29910 Oryza punctata OPUNC02G29910 I
OPUNC03G33030 Oryza punctata OPUNC03G33030 I
OPUNC08G13940 Oryza punctata OPUNC08G13940 I
orange1.1g015827m.g Citrus sinensis orange1.1g015827m.g I
orange1.1g021785m.g Citrus sinensis orange1.1g021785m.g I
orange1.1g046948m.g Citrus sinensis orange1.1g046948m.g I
orange1.1g047852m.g Citrus sinensis orange1.1g047852m.g I
ORGLA02G0278900 Oryza glaberrima ORGLA02G0278900 I
ORGLA03G0330500 Oryza glaberrima ORGLA03G0330500 I
ORUFI02G34050 Oryza rufipogon ORUFI02G34050 I
ORUFI08G17800 Oryza rufipogon ORUFI08G17800 I
OS02G0745250 Oryza sativa OS02G0745250 I
OS08G0436700 Oryza sativa OS08G0436700 I
Pavir.Aa00706 Panicum virgatum Pavir.Aa00706 I
Pavir.Ab02998 Panicum virgatum Pavir.Ab02998 I
Pavir.Bb02181 Panicum virgatum Pavir.Bb02181 I
Pavir.Fa00893 Panicum virgatum Pavir.Fa00893 I
Pavir.J03639 Panicum virgatum Pavir.J03639 I
Pavir.J08304 Panicum virgatum Pavir.J08304 I
Pavir.J26531 Panicum virgatum Pavir.J26531 I
PDK_20s1311871g001 Phoenix dactylifera PDK_20s1311871g001 I
PGSC0003DMG400001323 Solanum tuberosum PGSC0003DMG400001323 I
PGSC0003DMG400021119 Solanum tuberosum PGSC0003DMG400021119 I
PGSC0003DMG400031266 Solanum tuberosum PGSC0003DMG400031266 I
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I
PK01104.1 Cannabis sativa PK01104.1 I
PK17295.1 Cannabis sativa PK17295.1 N
PK18158.1 Cannabis sativa PK18158.1 I
Pm006506 Prunus mume Pm006506 I
Pm011037 Prunus mume Pm011037 I
Pm014764 Prunus mume Pm014764 I
Pm015876 Prunus mume Pm015876 I
POPTR_0001s11660 Populus trichocarpa POPTR_0001s11660 I
POPTR_0002s05820 Populus trichocarpa POPTR_0002s05820 I
POPTR_0004s12850 Populus trichocarpa POPTR_0004s12850 I
POPTR_0005s10080 Populus trichocarpa POPTR_0005s10080 I
POPTR_0005s22710 Populus trichocarpa POPTR_0005s22710 I
POPTR_0007s08340 Populus trichocarpa POPTR_0007s08340 I
POPTR_0017s11830 Populus trichocarpa POPTR_0017s11830 I
PRUPE_ppa016710mg Prunus persica PRUPE_ppa016710mg I
PRUPE_ppa022043mg Prunus persica PRUPE_ppa022043mg I
PRUPE_ppa022278mg Prunus persica PRUPE_ppa022278mg I
PRUPE_ppa026843mg Prunus persica PRUPE_ppa026843mg I
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I
SapurV1A.0085s0430 Salix purpurea SapurV1A.0085s0430 I
SapurV1A.0094s0540 Salix purpurea SapurV1A.0094s0540 I
SapurV1A.0354s0230 Salix purpurea SapurV1A.0354s0230 I
SapurV1A.0552s0060 Salix purpurea SapurV1A.0552s0060 I
SapurV1A.2065s0010 Salix purpurea SapurV1A.2065s0010 I
SapurV1A.2645s0010 Salix purpurea SapurV1A.2645s0010 I
Sb01g006410 Sorghum bicolor Sb01g006410 I
Sb02g024593 Sorghum bicolor Sb02g024593 I
Sb04g028015 Sorghum bicolor Sb04g028015 I
Sb07g021400 Sorghum bicolor Sb07g021400 I
Si015514m.g Setaria italica Si015514m.g I
Si019308m.g Setaria italica Si019308m.g I
Si032144m.g Setaria italica Si032144m.g I
Si036447m.g Setaria italica Si036447m.g I
Solyc02g069960.2 Solanum lycopersicum Solyc02g069960.2 I
Solyc02g087920.2 Solanum lycopersicum Solyc02g087920.2 I
Solyc05g007550.1 Solanum lycopersicum Solyc05g007550.1 I
Solyc07g045030.2 Solanum lycopersicum Solyc07g045030.2 I
TCM_001955 Theobroma cacao TCM_001955 I
TCM_018508 Theobroma cacao TCM_018508 I
TCM_032393 Theobroma cacao TCM_032393 I
Thhalv10007709m.g Eutrema salsugineum Thhalv10007709m.g I
Thhalv10017054m.g Eutrema salsugineum Thhalv10017054m.g I
Thhalv10019631m.g Eutrema salsugineum Thhalv10019631m.g I
Thhalv10027860m.g Eutrema salsugineum Thhalv10027860m.g I
Traes_2AS_C73DE621D Triticum aestivum Traes_2AS_C73DE621D I
Traes_2BS_2244C64CC Triticum aestivum Traes_2BS_2244C64CC I
Traes_2BS_3B6ABF5E6 Triticum aestivum Traes_2BS_3B6ABF5E6 I
Traes_2DS_8C3F6A558 Triticum aestivum Traes_2DS_8C3F6A558 I
Traes_2DS_E2F2E9EAF Triticum aestivum Traes_2DS_E2F2E9EAF I
Traes_5AL_F2A49EB8E Triticum aestivum Traes_5AL_F2A49EB8E I
Traes_5AL_F35B9FF8E Triticum aestivum Traes_5AL_F35B9FF8E I
Traes_5BL_2131D2B17 Triticum aestivum Traes_5BL_2131D2B17 I
Traes_5BL_38DFDFE41 Triticum aestivum Traes_5BL_38DFDFE41 I
Traes_5DL_0713E8429 Triticum aestivum Traes_5DL_0713E8429 I
Traes_6AL_0D7866801 Triticum aestivum Traes_6AL_0D7866801 I
Traes_6BL_A169A3ECB Triticum aestivum Traes_6BL_A169A3ECB I
Traes_6DL_DA233B945 Triticum aestivum Traes_6DL_DA233B945 I
TRIUR3_01901 Triticum urartu TRIUR3_01901 I
TRIUR3_04556 Triticum urartu TRIUR3_04556 I
TRIUR3_04557 Triticum urartu TRIUR3_04557 I
TRIUR3_04558 Triticum urartu TRIUR3_04558 N
TRIUR3_04784 Triticum urartu TRIUR3_04784 I
VIT_01s0026g02360 Vitis vinifera VIT_01s0026g02360 I
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I
VIT_19s0027g00860 Vitis vinifera VIT_19s0027g00860 I
VIT_19s0027g00870 Vitis vinifera VIT_19s0027g00870 I
VIT_19s0027g00880 Vitis vinifera VIT_19s0027g00880 I
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I