AAY99628 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 AAY99628 T051335_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAY99628 bHLH 109 161

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
B39674 Xenopus laevis B39674 I
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
PHUM287950 Pediculus humanus PHUM287950 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Vicugna pacos ENSVPAG00000008421 I
USF1 Pteropus vampyrus ENSPVAG00000005489 I
USF1 Pan troglodytes ENSPTRG00000001565 I
usf1 Xenopus tropicalis XB-GENE-5918718 I
USF1 Bos taurus ENSBTAG00000017873 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
USF1 Cavia porcellus ENSCPOG00000003957 I
USF1 Equus caballus ENSECAG00000004755 I
USF1 Felis catus ENSFCAG00000012307 I
USF1 Homo sapiens ENSG00000158773 D
USF1 Gorilla gorilla ENSGGOG00000003935 I
USF1 Loxodonta africana ENSLAFG00000011338 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Myotis lucifugus ENSMLUG00000009179 I
USF1 Macaca mulatta ENSMMUG00000002003 I
USF1 Monodelphis domestica ENSMODG00000005443 I
Usf1 Mus musculus ENSMUSG00000026641 D
USF1 Ochotona princeps ENSOPRG00000003858 I
usf1.S Xenopus laevis XB-GENE-6255904 I