CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

neurog3.S *(Xenopus laevis)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	XB-GENE-6055069	T051831_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NEUROG2 M02799_2.00	Homo sapiens	RMCATATGBY	RVCATATGKY	SELEX Jolma et al.(2013) NEUROG2_1	0.842	0.865
NEUROG2 M02800_2.00	Homo sapiens	RMCATATGBY	RVCATATGKY	SELEX Jolma et al.(2013) NEUROG2_2	0.842	0.865
NEUROG2 M04179_2.00	Homo sapiens	RVCATATGBY	RVCATATGBY	SELEX Yin et al.(2017) NEUROG2_eDBD_HT-SELEX	0.842	0.865
NEUROG2 M04181_2.00	Homo sapiens	RVCATRTGBY	RVCAYATGBY	SELEX Yin et al.(2017) NEUROG2_FL_HT-SELEX	0.842	0.865
Neurog2 M08758_2.00	Mus musculus	VBRRCAGATGGB	VCCATCTGYYVB	Misc Kulakovskiy et al.(2013) NGN2_MOUSE.H11MO.0.C	0.842	0.865
NEUROG2 M09879_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NGN2_Q3	0.842	0.865
NEUROG2 M04180_2.00	Homo sapiens	RVCATATGBY	RVCATATGBY	SELEX Yin et al.(2017) NEUROG2_eDBD_Methyl-HT-SELEX	0.842	0.865
NEUROG2 M04182_2.00	Homo sapiens	RMCRTRTGYY	RRCAYAYGKY	SELEX Yin et al.(2017) NEUROG2_FL_Methyl-HT-SELEX	0.842	0.865
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ACH41127	bHLH	87	139	RRVKANDRERNRMHNLNSALDALRSILPTFPDDAKLTKIETLRFAHNYIWALS

Links
Other bHLH family TFs
Other *Xenopus laevis* TFs