hif1a (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-946622 T051920_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.914 0.904
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.914 0.904
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.914 0.904
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.914 0.904
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.914 0.904
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.914 0.904
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.914 0.904
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.914 0.904
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.914 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH84989 bHLH 18 69

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GA25755 Drosophila pseudoobscura FBgn0247132 N
GG21684 Drosophila erecta FBgn0113862 N
GK15535 Drosophila willistoni FBgn0217540 N
GM17063 Drosophila sechellia FBgn0171975 N
ham Drosophila melanogaster FBgn0045852 N