AMTR_s00031p00017860 (Amborella trichopoda)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AMTR_s00031p00017860 T056751_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.791 0.860
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.791 0.860
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.791 0.860
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.791 0.860
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.791 0.860
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.791 0.840
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.791 0.840
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.791 0.840
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.791 0.840
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.791 0.840
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.791 0.840
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.791 0.840
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.791 0.840
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.791 0.820
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16483 bZIP 187 236

Links

Other bZIP family TFs
Other Amborella trichopoda TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N
Bo2g055720 Brassica oleracea Bo2g055720 N
Bo6g099030 Brassica oleracea Bo6g099030 N
Bo6g103720 Brassica oleracea Bo6g103720 N
Bra004096 Brassica rapa Bra004096 N
Bra004217 Brassica rapa Bra004217 N
Bra034007 Brassica rapa Bra034007 N
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N
Carubv10022369m.g Capsella rubella Carubv10022369m.g N
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N
Ca_08511 Cicer arietinum Ca_08511 N
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N
Cla000701 Citrullus lanatus Cla000701 N
CMTA4 Arabidopsis thaliana AT1G67310 N
Cucsa.349690 Cucumis sativus Cucsa.349690 N
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N
GLYMA05G28090 Glycine max GLYMA05G28090 N
GLYMA08G11080 Glycine max GLYMA08G11080 N
GLYMA11G36930 Glycine max GLYMA11G36930 N
GLYMA18G00840 Glycine max GLYMA18G00840 N
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N
Lus10003119.g Linum usitatissimum Lus10003119.g N
Lus10011352.g Linum usitatissimum Lus10011352.g N
MDP0000262800 Malus domestica MDP0000262800 N
mgf025436m Mimulus guttatus mgf025436m N
MTR_3g085050 Medicago truncatula MTR_3g085050 N
MTR_8g080800 Medicago truncatula MTR_8g080800 N
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N
PK06349.1 Cannabis sativa PK06349.1 N
Pm007031 Prunus mume Pm007031 N
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N
TCM_008731 Theobroma cacao TCM_008731 N
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N