Bo9g003700 (Brassica oleracea)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bo9g003700 T057360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.869 0.938
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.853 0.688
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.852 0.672
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.849 0.656
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.836 0.703
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.836 0.703
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.831 0.750
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.831 0.750
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.831 0.750
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.807 0.609
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.807 0.609
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.807 0.609
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.807 0.609
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.807 0.609
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.787 0.531
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.787 0.531
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.786 0.547
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.786 0.547
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.785 0.594
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.784 0.516
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.784 0.516
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.783 0.609
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.783 0.609
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.783 0.609
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.782 0.625
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.782 0.625
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.782 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g003700.1 bZIP 246 309

Links

Other bZIP family TFs
Other Brassica oleracea TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00001p00058370 Amborella trichopoda AMTR_s00001p00058370 N 0.000
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.000
cassava46941.m1 Manihot esculenta cassava46941.m1 I 0.000
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.000
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.000
Cucsa.046310 Cucumis sativus Cucsa.046310 N 0.000
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.000
F775_02791 Aegilops tauschii F775_02791 I 0.000
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I 0.000
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.000
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.000
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.000
GLYMA11G08905 Glycine max GLYMA11G08905 N 0.000
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.000
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.000
GRMZM2G067624 Zea mays GRMZM2G067624 N 0.000
GRMZM2G113779 Zea mays GRMZM2G113779 N 0.000
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.000
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.000
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.000
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I 0.000
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.000
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.000
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.000
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.000
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.000
Pavir.Bb02800 Panicum virgatum Pavir.Bb02800 N 0.000
Pm010075 Prunus mume Pm010075 I 0.000
Pm014154 Prunus mume Pm014154 I 0.000
Pm025028 Prunus mume Pm025028 I 0.000
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.000
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.000
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.000
Si010262m.g Setaria italica Si010262m.g I 0.000
Si031154m.g Setaria italica Si031154m.g I 0.000
Si032170m.g Setaria italica Si032170m.g I 0.000
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.000
TCM_011483 Theobroma cacao TCM_011483 I 0.000
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.000
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I 0.000
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.000
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.000
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.000