atf4a (Danio rerio)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSDARG00000039515 T059409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf4
M00759_2.00 		Mus musculus
NNNNKRCDHVHNN
NNDBDHGYMNNNN		 PBM
Weirauch et al.(2013)
pTH1014 		0.847 0.778
Atf4
M02865_2.00 		Mus musculus
DRBATGAYGCAATM
KATTGCRTCATVYH		 SELEX
Jolma et al.(2013)
Atf4_1 		0.847 0.778
Atf4
M08833_2.00 		Mus musculus
DNMTGATGCAAY
RTTGCATCAKNH		 Misc
Kulakovskiy et al.(2013)
ATF4_MOUSE.H11MO.0.A 		0.847 0.778
Atf4
M09496_2.00 		Mus musculus
MTGATGYAAY
RTTRCATCAK		 Misc
Heinz et al.(2010)
MEF-Atf4_GSE35681 		0.847 0.778
ATF4
M02834_2.00 		Homo sapiens
DNMTGAYGCAAYM
KRTTGCRTCAKNH		 SELEX
Jolma et al.(2013)
ATF4_1 		0.847 0.762
ATF4
M04274_2.00 		Homo sapiens
RDATGACGTCATHY
RDATGACGTCATHY		 SELEX
Yin et al.(2017)
ATF4_eDBD_HT-SELEX 		0.847 0.762
ATF4
M04276_2.00 		Homo sapiens
RKATGACGTCATMY
RKATGACGTCATMY		 SELEX
Yin et al.(2017)
ATF4_FL_HT-SELEX 		0.847 0.762
ATF4
M04027_2.00 		Homo sapiens
VNATGACGTCABNY
RNVTGACGTCATNB		 SELEX
Rodriguez-Martinez et al.(2017)
ATF4.1 		0.847 0.762
ATF4
M08796_2.00 		Homo sapiens
DNMTGATGCAAY
RTTGCATCAKNH		 Misc
Kulakovskiy et al.(2013)
ATF4_HUMAN.H11MO.0.A 		0.847 0.762
ATF4
M09963_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q2 		0.847 0.762
ATF4
M09964_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q5 		0.847 0.762
ATF4
M09965_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF4_Q6 		0.847 0.762
ATF4
M04275_2.00 		Homo sapiens
RKATGACATCATCY
RGATGATGTCATMY		 SELEX
Yin et al.(2017)
ATF4_eDBD_Methyl-HT-SELEX 		0.847 0.762
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000042969 bZIP 265 327

Links

Other bZIP family TFs
Other Danio rerio TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29576.m000223 Ricinus communis 29576.m000223 I
29739.m003611 Ricinus communis 29739.m003611 I
30068.m002635 Ricinus communis 30068.m002635 I
30206.m000769 Ricinus communis 30206.m000769 I
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I
AT-GTL1 Arabidopsis thaliana AT1G33240 D
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I
AT1G76880 Arabidopsis thaliana AT1G76880 D
BGIOSGA005934 Oryza indica BGIOSGA005934 I
BGIOSGA007300 Oryza indica BGIOSGA007300 I
BGIOSGA011584 Oryza indica BGIOSGA011584 I
BGIOSGA014631 Oryza indica BGIOSGA014631 I
BGIOSGA031553 Oryza indica BGIOSGA031553 I
Bo2g091240 Brassica oleracea Bo2g091240 I
Bo6g049430 Brassica oleracea Bo6g049430 I
Bo6g083670 Brassica oleracea Bo6g083670 I
Bo6g083690 Brassica oleracea Bo6g083690 I
Bo6g120870 Brassica oleracea Bo6g120870 I
Bo8g027460 Brassica oleracea Bo8g027460 I
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I
Bra003702 Brassica rapa Bra003702 I
Bra003703 Brassica rapa Bra003703 I
Bra008285 Brassica rapa Bra008285 I
Bra015716 Brassica rapa Bra015716 I
Bra036731 Brassica rapa Bra036731 I
Bra040010 Brassica rapa Bra040010 I
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I
Carubv10008638m.g Capsella rubella Carubv10008638m.g I
Carubv10019974m.g Capsella rubella Carubv10019974m.g I
Carubv10020016m.g Capsella rubella Carubv10020016m.g I
cassava16715.m1 Manihot esculenta cassava16715.m1 I
cassava16854.m1 Manihot esculenta cassava16854.m1 I
cassava21480.m1 Manihot esculenta cassava21480.m1 I
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I
Ca_04385 Cicer arietinum Ca_04385 I
Ca_04386 Cicer arietinum Ca_04386 I
Ca_25135 Cicer arietinum Ca_25135 I
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I
Cla001992 Citrullus lanatus Cla001992 I
Cla005046 Citrullus lanatus Cla005046 I
Cla007910 Citrullus lanatus Cla007910 I
Cucsa.193210 Cucumis sativus Cucsa.193210 I
Cucsa.204000 Cucumis sativus Cucsa.204000 I
Cucsa.250070 Cucumis sativus Cucsa.250070 I
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I
F775_24861 Aegilops tauschii F775_24861 N
F775_26337 Aegilops tauschii F775_26337 I
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N
GLYMA02G09060 Glycine max GLYMA02G09060 I
GLYMA04G39400 Glycine max GLYMA04G39400 N
GLYMA06G15500 Glycine max GLYMA06G15500 N
GLYMA09G19750 Glycine max GLYMA09G19750 N
GLYMA10G36950 Glycine max GLYMA10G36950 I
GLYMA10G36960 Glycine max GLYMA10G36960 I
GLYMA15G12591 Glycine max GLYMA15G12591 N
GLYMA16G28250 Glycine max GLYMA16G28250 I
GLYMA20G30640 Glycine max GLYMA20G30640 I
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I
GRMZM2G016649 Zea mays GRMZM2G016649 I
GRMZM2G037128 Zea mays GRMZM2G037128 I
GRMZM2G063203 Zea mays GRMZM2G063203 I
GRMZM2G111760 Zea mays GRMZM2G111760 I
GRMZM2G169580 Zea mays GRMZM2G169580 I
GRMZM2G414159 Zea mays GRMZM2G414159 I
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I
LPERR02G00380 Leersia perrieri LPERR02G00380 I
LPERR02G21190 Leersia perrieri LPERR02G21190 I
LPERR03G01010 Leersia perrieri LPERR03G01010 I
LPERR04G16420 Leersia perrieri LPERR04G16420 I
LPERR10G12070 Leersia perrieri LPERR10G12070 I
Lus10018888.g Linum usitatissimum Lus10018888.g I
Lus10020873.g Linum usitatissimum Lus10020873.g N
Lus10028584.g Linum usitatissimum Lus10028584.g I
Lus10033504.g Linum usitatissimum Lus10033504.g N
MDP0000122269 Malus domestica MDP0000122269 I
MDP0000156139 Malus domestica MDP0000156139 I
MDP0000451038 Malus domestica MDP0000451038 I
MDP0000451107 Malus domestica MDP0000451107 I
MDP0000701272 Malus domestica MDP0000701272 I
mgf004276m Mimulus guttatus mgf004276m I
mgf015314m Mimulus guttatus mgf015314m N
mgf018892m Mimulus guttatus mgf018892m N
mgf021983m Mimulus guttatus mgf021983m I
MLOC_14207 Hordeum vulgare MLOC_14207 I
MLOC_22988 Hordeum vulgare MLOC_22988 I
MLOC_25460 Hordeum vulgare MLOC_25460 I
MLOC_70549 Hordeum vulgare MLOC_70549 I
MLOC_74813 Hordeum vulgare MLOC_74813 I
MTR_1g098870 Medicago truncatula MTR_1g098870 I
MTR_1g098900 Medicago truncatula MTR_1g098900 I
MTR_6g035370 Medicago truncatula MTR_6g035370 I
OB02G10400 Oryza brachyantha OB02G10400 I
OB02G33250 Oryza brachyantha OB02G33250 I
OB04G27270 Oryza brachyantha OB04G27270 I
OBART02G00380 Oryza barthii OBART02G00380 I
OBART02G25970 Oryza barthii OBART02G25970 I
OBART04G20290 Oryza barthii OBART04G20290 I
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I
OLONG_017894 Oryza longistaminata OLONG_017894 I
OMERI02G09240 Oryza meridionalis OMERI02G09240 I
OMERI03G00890 Oryza meridionalis OMERI03G00890 I
OMERI10G12340 Oryza meridionalis OMERI10G12340 I
ONIVA02G00390 Oryza nivara ONIVA02G00390 I
ONIVA03G01170 Oryza nivara ONIVA03G01170 I
ONIVA04G18520 Oryza nivara ONIVA04G18520 I
ONIVA05G15440 Oryza nivara ONIVA05G15440 I
ONIVA10G17310 Oryza nivara ONIVA10G17310 I
OPUNC02G00050 Oryza punctata OPUNC02G00050 I
OPUNC02G23730 Oryza punctata OPUNC02G23730 I
OPUNC04G17930 Oryza punctata OPUNC04G17930 I
OPUNC10G14260 Oryza punctata OPUNC10G14260 I
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I
OS02G0104500 Oryza sativa OS02G0104500 D
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I
Pavir.J25029 Panicum virgatum Pavir.J25029 I
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I
PK14727.1 Cannabis sativa PK14727.1 I
PK15172.1 Cannabis sativa PK15172.1 D
PK17889.1 Cannabis sativa PK17889.1 N
PK24122.1 Cannabis sativa PK24122.1 I
PK26613.1 Cannabis sativa PK26613.1 I
Pm001889 Prunus mume Pm001889 I
Pm022570 Prunus mume Pm022570 I
Pm022572 Prunus mume Pm022572 I
Pm024289 Prunus mume Pm024289 I
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I
Sb01g017120 Sorghum bicolor Sb01g017120 I
Sb04g000520 Sorghum bicolor Sb04g000520 I
Sb04g033390 Sorghum bicolor Sb04g033390 I
Sb06g023980 Sorghum bicolor Sb06g023980 I
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I
Si012121m.g Setaria italica Si012121m.g I
Si016578m.g Setaria italica Si016578m.g I
Si033157m.g Setaria italica Si033157m.g I
Si034382m.g Setaria italica Si034382m.g I
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I
TCM_001348 Theobroma cacao TCM_001348 I
TCM_015563 Theobroma cacao TCM_015563 I
TCM_035565 Theobroma cacao TCM_035565 I
TCM_035571 Theobroma cacao TCM_035571 I
TCM_037381 Theobroma cacao TCM_037381 I
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I
TRIUR3_29570 Triticum urartu TRIUR3_29570 I
TRIUR3_30093 Triticum urartu TRIUR3_30093 I
TRIUR3_33328 Triticum urartu TRIUR3_33328 I
TRIUR3_33826 Triticum urartu TRIUR3_33826 I
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I