CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BATF
(
Otolemur garnettii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSOGAG00000010133
T060703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.875
0.984
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.875
0.984
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.864
0.968
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.864
0.968
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.864
0.968
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.864
0.968
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.864
0.968
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.864
0.968
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.864
0.968
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.864
0.968
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.825
0.635
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.825
0.635
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.825
0.635
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.825
0.635
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.825
0.635
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.825
0.635
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.825
0.635
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.825
0.635
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.825
0.635
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.823
0.603
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000009055
bZIP
24
86
SDDVRKVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEEMKYFTSVL
Links
Other
bZIP
family TFs
Other
Otolemur garnettii
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000327
Anopheles albimanus
AALB000327
I
AARA005138
Anopheles arabiensis
AARA005138
I
ACEP26487
Atta cephalotes
ACEP26487
I
ACHR004287
Anopheles christyi
ACHR004287
I
ADIR006768
Anopheles dirus
ADIR006768
I
AEPI004828
Anopheles epiroticus
AEPI004828
I
AFUN001295
Anopheles funestus
AFUN001295
I
AMAM009154
Anopheles maculatus
AMAM009154
I
AMEC016887
Anopheles melas
AMEC016887
I
AMIN006279
Anopheles minimus
AMIN006279
I
ANCDUO_09759
Ancylostoma duodenale
ANCDUO_09759
I
AQUA000678
Anopheles quadriannulatus
AQUA000678
I
BGLB001705
Biomphalaria glabrata
BGLB001705
I
BGLB005976
Biomphalaria glabrata
BGLB005976
I
CGOC_0000387301
Cylicostephanus goldi
CGOC_0000387301
I
Crx
Mus musculus
ENSMUSG00000041578
D
D918_03762
Trichuris suis
D918_03762
N
EFV59137
Trichinella spiralis
EFV59137
N
ENSCING00000013809
Ciona intestinalis
ENSCING00000013809
I
ENSLACG00000003225
Latimeria chalumnae
ENSLACG00000003225
N
ENSMEUG00000002781
Macropus eugenii
ENSMEUG00000002781
I
ENSMICG00000004221
Microcebus murinus
ENSMICG00000004221
I
e_gw.814.10.1
Branchiostoma floridae
e_gw.814.10.1
I
GB40331
Apis mellifera
GB40331
I
GB42226
Apis mellifera
GB42226
I
genemark-nMf.1.1.scaf05885-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf05885-processed-gene-0.2
I
Hmbox1
Mus musculus
ENSMUSG00000021972
D
Hmbox1
Dipodomys ordii
ENSDORG00000015971
N
HMBOX1
Homo sapiens
ENSG00000147421
D
HMBOX1
Microcebus murinus
ENSMICG00000010422
N
HMBOX1
Ochotona princeps
ENSOPRG00000013613
N
Hnf1a
Mus musculus
ENSMUSG00000029556
D
HNF1A
Homo sapiens
ENSG00000135100
D
ISCW005275
Ixodes scapularis
ISCW005275
I
ISCW017713
Ixodes scapularis
ISCW017713
I
L893_g29073
Steinernema glaseri
L893_g29073
I
LDEC010767
Leptinotarsa decemlineata
LDEC010767
I
maker-nMf.1.1.scaf05852-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf05852-augustus-gene-0.4
I
MESCA003695
Megaselia scalaris
MESCA003695
I
MhA1_Contig1070.frz3.gene23
Meloidogyne hapla
MhA1_Contig1070.frz3.gene23
I
Ogr07758
Ophisaurus gracilis
Ogr07758
N
PXEA_0000709901
Protopolystoma xenopodis
PXEA_0000709901
I
SINV23302
Solenopsis invicta
SINV23302
I
SPU_008196
Strongylocentrotus purpuratus
SPU_008196
N
SROB_0000568701
Schistosoma rodhaini
SROB_0000568701
I
SVUK_0000982701
Strongylus vulgaris
SVUK_0000982701
I
TTRE_0000607501
Trichuris trichiura
TTRE_0000607501
N