CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr2G20490_001
(
Musa acuminata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GSMUA_Achr2G20490_001
T063253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.798
0.597
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM
KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.798
0.597
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.798
0.597
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.798
0.597
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.798
0.597
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr2P20490_001
bZIP
160
221
VVLRRQKRMIKNRESAARSRERKQAYTVELESLVTRLEEENVTLVREQEEQHKMRFQQLMVN
Links
Other
bZIP
family TFs
Other
Musa acuminata
TFs
227 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29589.m001281
Ricinus communis
29589.m001281
N
0.000
30054.m000824
Ricinus communis
30054.m000824
N
0.000
30078.m002228
Ricinus communis
30078.m002228
N
0.000
30170.m013811
Ricinus communis
30170.m013811
N
0.000
Al_scaffold_0001_3341
Arabidopsis lyrata
Al_scaffold_0001_3341
N
0.000
AMTR_s00002p00211460
Amborella trichopoda
AMTR_s00002p00211460
N
0.000
AMTR_s00008p00208550
Amborella trichopoda
AMTR_s00008p00208550
N
0.000
Aquca_005_00468
Aquilegia coerulea
Aquca_005_00468
N
0.000
Aquca_009_01064
Aquilegia coerulea
Aquca_009_01064
N
0.000
Aquca_019_00150
Aquilegia coerulea
Aquca_019_00150
N
0.000
AT1G32700
Arabidopsis thaliana
AT1G32700
N
0.000
AT1G76590
Arabidopsis thaliana
AT1G76590
N
0.000
AT2G27930
Arabidopsis thaliana
AT2G27930
N
0.000
BGIOSGA005806
Oryza indica
BGIOSGA005806
N
0.000
BGIOSGA014451
Oryza indica
BGIOSGA014451
N
0.000
BGIOSGA026486
Oryza indica
BGIOSGA026486
N
0.000
Bo4g073120
Brassica oleracea
Bo4g073120
N
0.000
Bo4g164920
Brassica oleracea
Bo4g164920
N
0.000
Bo5g030950
Brassica oleracea
Bo5g030950
N
0.000
Bo5g049240
Brassica oleracea
Bo5g049240
N
0.000
Bo6g120700
Brassica oleracea
Bo6g120700
N
0.000
Bo8g070540
Brassica oleracea
Bo8g070540
N
0.000
Bostr.20129s0097
Boechera stricta
Bostr.20129s0097
N
0.000
Bostr.27991s0138
Boechera stricta
Bostr.27991s0138
N
0.000
Bostr.3359s0088
Boechera stricta
Bostr.3359s0088
N
0.000
Bostr.7128s0691
Boechera stricta
Bostr.7128s0691
N
0.000
Bra011992
Brassica rapa
Bra011992
N
0.000
Bra015731
Brassica rapa
Bra015731
N
0.000
Bra016441
Brassica rapa
Bra016441
N
0.000
Bra023280
Brassica rapa
Bra023280
N
0.000
Bra025865
Brassica rapa
Bra025865
N
0.000
Bra034379
Brassica rapa
Bra034379
N
0.000
BRADI3G34160
Brachypodium distachyon
BRADI3G34160
N
0.000
BRADI3G43000
Brachypodium distachyon
BRADI3G43000
N
0.000
BRADI3G52170
Brachypodium distachyon
BRADI3G52170
N
0.000
Cagra.15046s0001
Capsella grandiflora
Cagra.15046s0001
N
0.000
Cagra.2281s0027
Capsella grandiflora
Cagra.2281s0027
N
0.000
Cagra.4962s0001
Capsella grandiflora
Cagra.4962s0001
N
0.000
Cagra.7414s0001
Capsella grandiflora
Cagra.7414s0001
N
0.000
Carubv10009696m.g
Capsella rubella
Carubv10009696m.g
N
0.000
Carubv10009979m.g
Capsella rubella
Carubv10009979m.g
N
0.000
Carubv10020852m.g
Capsella rubella
Carubv10020852m.g
N
0.000
Carubv10024278m.g
Capsella rubella
Carubv10024278m.g
N
0.000
cassava15058.m1
Manihot esculenta
cassava15058.m1
N
0.000
cassava2216.valid.m1
Manihot esculenta
cassava2216.valid.m1
N
0.000
cassava28497.m1
Manihot esculenta
cassava28497.m1
N
0.000
cassava37607.valid.m1
Manihot esculenta
cassava37607.valid.m1
N
0.000
cassava7406.valid.m1
Manihot esculenta
cassava7406.valid.m1
N
0.000
cassava9017.m1
Manihot esculenta
cassava9017.m1
N
0.000
Ca_00735
Cicer arietinum
Ca_00735
N
0.000
Ca_11505
Cicer arietinum
Ca_11505
N
0.000
Ca_12361
Cicer arietinum
Ca_12361
N
0.000
Ca_17446
Cicer arietinum
Ca_17446
N
0.000
Ca_19047
Cicer arietinum
Ca_19047
N
0.000
chr3.CM0396.500.nd
Lotus japonicus
chr3.CM0396.500.nd
N
0.000
Ciclev10002292m.g
Citrus clementina
Ciclev10002292m.g
N
0.000
Ciclev10012712m.g
Citrus clementina
Ciclev10012712m.g
N
0.000
Ciclev10012756m.g
Citrus clementina
Ciclev10012756m.g
N
0.000
Ciclev10030107m.g
Citrus clementina
Ciclev10030107m.g
N
0.000
Cla001071
Citrullus lanatus
Cla001071
N
0.000
Cla008966
Citrullus lanatus
Cla008966
N
0.000
Cla016461
Citrullus lanatus
Cla016461
N
0.000
Cla018029
Citrullus lanatus
Cla018029
N
0.000
Cucsa.200310
Cucumis sativus
Cucsa.200310
N
0.000
Cucsa.313040
Cucumis sativus
Cucsa.313040
N
0.000
Cucsa.321900
Cucumis sativus
Cucsa.321900
N
0.000
Cucsa.378840
Cucumis sativus
Cucsa.378840
N
0.000
estExt_gwp_gw1.C_1330066
Physcomitrella patens
estExt_gwp_gw1.C_1330066
N
0.000
Eucgr.A01594
Eucalyptus grandis
Eucgr.A01594
N
0.000
Eucgr.B03915
Eucalyptus grandis
Eucgr.B03915
N
0.000
Eucgr.D02206
Eucalyptus grandis
Eucgr.D02206
N
0.000
Eucgr.E00276
Eucalyptus grandis
Eucgr.E00276
N
0.000
evm.TU.supercontig_30.61
Carica papaya
evm.TU.supercontig_30.61
N
0.000
evm.TU.supercontig_5.128
Carica papaya
evm.TU.supercontig_5.128
N
0.000
evm.TU.supercontig_71.62
Carica papaya
evm.TU.supercontig_71.62
N
0.000
e_gw1.1.253.1
Physcomitrella patens
e_gw1.1.253.1
N
0.000
e_gw1.6.367.1
Physcomitrella patens
e_gw1.6.367.1
N
0.000
F775_22386
Aegilops tauschii
F775_22386
N
0.000
F775_28196
Aegilops tauschii
F775_28196
N
0.000
F775_30314
Aegilops tauschii
F775_30314
N
0.000
fgenesh1_pg.scaffold_102000043
Physcomitrella patens
fgenesh1_pg.scaffold_102000043
N
0.000
fgenesh2_kg.2__1947__AT1G76590.1
Arabidopsis lyrata
fgenesh2_kg.2__1947__AT1G76590.1
N
0.000
gene00954-v1.0-hybrid
Fragaria vesca
gene00954-v1.0-hybrid
N
0.000
gene02186-v1.0-hybrid
Fragaria vesca
gene02186-v1.0-hybrid
N
0.000
GLYMA01G02180
Glycine max
GLYMA01G02180
N
0.000
GLYMA01G11390
Glycine max
GLYMA01G11390
N
0.000
GLYMA03G34530
Glycine max
GLYMA03G34530
N
0.000
GLYMA08G36641
Glycine max
GLYMA08G36641
N
0.000
GLYMA09G33770
Glycine max
GLYMA09G33770
N
0.000
GLYMA10G07240
Glycine max
GLYMA10G07240
N
0.000
GLYMA12G08810
Glycine max
GLYMA12G08810
N
0.000
GLYMA13G21140
Glycine max
GLYMA13G21140
N
0.000
GLYMA19G37220
Glycine max
GLYMA19G37220
N
0.000
Gorai.001G117900
Gossypium raimondii
Gorai.001G117900
N
0.000
Gorai.003G183000
Gossypium raimondii
Gorai.003G183000
N
0.000
Gorai.006G159900
Gossypium raimondii
Gorai.006G159900
N
0.000
Gorai.006G217100
Gossypium raimondii
Gorai.006G217100
N
0.000
Gorai.008G226100
Gossypium raimondii
Gorai.008G226100
N
0.000
Gorai.009G411100
Gossypium raimondii
Gorai.009G411100
N
0.000
GRMZM2G004548
Zea mays
GRMZM2G004548
N
0.000
GRMZM2G086403
Zea mays
GRMZM2G086403
N
0.000
GRMZM2G091044
Zea mays
GRMZM2G091044
N
0.000
GRMZM2G094168
Zea mays
GRMZM2G094168
N
0.000
GRMZM2G131280
Zea mays
GRMZM2G131280
N
0.000
GRMZM2G171934
Zea mays
GRMZM2G171934
N
0.000
GSMUA_Achr11G17810_001
Musa acuminata
GSMUA_Achr11G17810_001
N
0.000
GSMUA_Achr2G18160_001
Musa acuminata
GSMUA_Achr2G18160_001
N
0.000
GSMUA_Achr4G19110_001
Musa acuminata
GSMUA_Achr4G19110_001
N
0.000
GSMUA_Achr4G27280_001
Musa acuminata
GSMUA_Achr4G27280_001
N
0.000
GSMUA_Achr5G03420_001
Musa acuminata
GSMUA_Achr5G03420_001
N
0.000
GSMUA_Achr5G13970_001
Musa acuminata
GSMUA_Achr5G13970_001
N
0.000
GSMUA_Achr5G18120_001
Musa acuminata
GSMUA_Achr5G18120_001
N
0.000
GSMUA_Achr7G04460_001
Musa acuminata
GSMUA_Achr7G04460_001
N
0.000
GSMUA_AchrUn_randomG07560_001
Musa acuminata
GSMUA_AchrUn_randomG07560_001
N
0.000
LjSGA_028172.2
Lotus japonicus
LjSGA_028172.2
N
0.000
LPERR02G23300
Leersia perrieri
LPERR02G23300
N
0.000
LPERR04G19240
Leersia perrieri
LPERR04G19240
N
0.000
LPERR08G20370
Leersia perrieri
LPERR08G20370
N
0.000
LPERR10G15280
Leersia perrieri
LPERR10G15280
N
0.000
Lus10000482.g
Linum usitatissimum
Lus10000482.g
N
0.000
Lus10004577.g
Linum usitatissimum
Lus10004577.g
N
0.000
Lus10014396.g
Linum usitatissimum
Lus10014396.g
N
0.000
Lus10027735.g
Linum usitatissimum
Lus10027735.g
N
0.000
Lus10030968.g
Linum usitatissimum
Lus10030968.g
N
0.000
Lus10035554.g
Linum usitatissimum
Lus10035554.g
N
0.000
Lus10040082.g
Linum usitatissimum
Lus10040082.g
N
0.000
MDP0000133007
Malus domestica
MDP0000133007
N
0.000
MDP0000133008
Malus domestica
MDP0000133008
N
0.000
MDP0000225862
Malus domestica
MDP0000225862
N
0.000
MDP0000316069
Malus domestica
MDP0000316069
N
0.000
MDP0000553473
Malus domestica
MDP0000553473
N
0.000
MDP0000570901
Malus domestica
MDP0000570901
N
0.000
mgf006916m
Mimulus guttatus
mgf006916m
N
0.000
mgf013167m
Mimulus guttatus
mgf013167m
N
0.000
mgf023930m
Mimulus guttatus
mgf023930m
N
0.000
MLOC_23439
Hordeum vulgare
MLOC_23439
N
0.000
MLOC_63157
Hordeum vulgare
MLOC_63157
N
0.000
MLOC_69202
Hordeum vulgare
MLOC_69202
N
0.000
MTR_1g062160
Medicago truncatula
MTR_1g062160
N
0.000
MTR_5g030130
Medicago truncatula
MTR_5g030130
N
0.000
MTR_7g102790
Medicago truncatula
MTR_7g102790
N
0.000
MTR_8g066820
Medicago truncatula
MTR_8g066820
N
0.000
OB02G35810
Oryza brachyantha
OB02G35810
N
0.000
OB04G30420
Oryza brachyantha
OB04G30420
N
0.000
OB08G30470
Oryza brachyantha
OB08G30470
N
0.000
OB10G26540
Oryza brachyantha
OB10G26540
N
0.000
OBART02G28660
Oryza barthii
OBART02G28660
N
0.000
OBART04G23520
Oryza barthii
OBART04G23520
N
0.000
OBART08G23610
Oryza barthii
OBART08G23610
N
0.000
OGLUM02G29250
Oryza glumaepatula
OGLUM02G29250
N
0.000
OGLUM04G23440
Oryza glumaepatula
OGLUM04G23440
N
0.000
OGLUM08G25080
Oryza glumaepatula
OGLUM08G25080
N
0.000
OLONG_020563
Oryza longistaminata
OLONG_020563
N
0.000
OLONG_023395
Oryza longistaminata
OLONG_023395
N
0.000
OMERI08G18450
Oryza meridionalis
OMERI08G18450
N
0.000
ONIVA02G31400
Oryza nivara
ONIVA02G31400
N
0.000
ONIVA04G22750
Oryza nivara
ONIVA04G22750
N
0.000
ONIVA08G26670
Oryza nivara
ONIVA08G26670
N
0.000
OPUNC02G26310
Oryza punctata
OPUNC02G26310
N
0.000
OPUNC04G21040
Oryza punctata
OPUNC04G21040
N
0.000
OPUNC08G21610
Oryza punctata
OPUNC08G21610
N
0.000
orange1.1g025742m.g
Citrus sinensis
orange1.1g025742m.g
N
0.000
orange1.1g027730m.g
Citrus sinensis
orange1.1g027730m.g
N
0.000
orange1.1g028382m.g
Citrus sinensis
orange1.1g028382m.g
N
0.000
orange1.1g028583m.g
Citrus sinensis
orange1.1g028583m.g
N
0.000
ORGLA02G0246600
Oryza glaberrima
ORGLA02G0246600
N
0.000
ORGLA04G0200500
Oryza glaberrima
ORGLA04G0200500
N
0.000
ORGLA08G0190300
Oryza glaberrima
ORGLA08G0190300
N
0.000
ORUFI02G30220
Oryza rufipogon
ORUFI02G30220
N
0.000
ORUFI04G25190
Oryza rufipogon
ORUFI04G25190
N
0.000
ORUFI08G26100
Oryza rufipogon
ORUFI08G26100
N
0.000
OS02G0692700
Oryza sativa
OS02G0692700
N
0.000
OS04G0591100
Oryza sativa
OS04G0591100
N
0.000
OS08G0560300
Oryza sativa
OS08G0560300
N
0.000
Pavir.Aa01152
Panicum virgatum
Pavir.Aa01152
N
0.000
Pavir.Ab01769
Panicum virgatum
Pavir.Ab01769
N
0.000
Pavir.Eb02108
Panicum virgatum
Pavir.Eb02108
N
0.000
Pavir.Fa00017
Panicum virgatum
Pavir.Fa00017
N
0.000
Pavir.Fb02226
Panicum virgatum
Pavir.Fb02226
N
0.000
Pavir.Ga00766
Panicum virgatum
Pavir.Ga00766
N
0.000
Pavir.Gb00818
Panicum virgatum
Pavir.Gb00818
N
0.000
Pavir.J05501
Panicum virgatum
Pavir.J05501
N
0.000
Pavir.J13246
Panicum virgatum
Pavir.J13246
N
0.000
PGSC0003DMG400008598
Solanum tuberosum
PGSC0003DMG400008598
N
0.000
PGSC0003DMG400009931
Solanum tuberosum
PGSC0003DMG400009931
N
0.000
PK20928.1
Cannabis sativa
PK20928.1
N
0.000
PK29286.1
Cannabis sativa
PK29286.1
N
0.000
Pm001175
Prunus mume
Pm001175
N
0.000
Pm012470
Prunus mume
Pm012470
N
0.000
Pm022874
Prunus mume
Pm022874
N
0.000
Pm023220
Prunus mume
Pm023220
N
0.000
Pm026291
Prunus mume
Pm026291
N
0.000
POPTR_0001s02390
Populus trichocarpa
POPTR_0001s02390
N
0.000
POPTR_0001s21990
Populus trichocarpa
POPTR_0001s21990
N
0.000
POPTR_0002s00430
Populus trichocarpa
POPTR_0002s00430
N
0.000
POPTR_0003s09160
Populus trichocarpa
POPTR_0003s09160
N
0.000
POPTR_0006s12100
Populus trichocarpa
POPTR_0006s12100
N
0.000
POPTR_0016s10920
Populus trichocarpa
POPTR_0016s10920
N
0.000
PRUPE_ppa010445mg
Prunus persica
PRUPE_ppa010445mg
N
0.000
PRUPE_ppa011266mg
Prunus persica
PRUPE_ppa011266mg
N
0.000
PRUPE_ppa011458mg
Prunus persica
PRUPE_ppa011458mg
N
0.000
PRUPE_ppa011630mg
Prunus persica
PRUPE_ppa011630mg
N
0.000
SapurV1A.0151s0140
Salix purpurea
SapurV1A.0151s0140
N
0.000
SapurV1A.0226s0270
Salix purpurea
SapurV1A.0226s0270
N
0.000
SapurV1A.0288s0160
Salix purpurea
SapurV1A.0288s0160
N
0.000
SapurV1A.0360s0060
Salix purpurea
SapurV1A.0360s0060
N
0.000
SapurV1A.0554s0100
Salix purpurea
SapurV1A.0554s0100
N
0.000
SapurV1A.0555s0010
Salix purpurea
SapurV1A.0555s0010
N
0.000
SapurV1A.1507s0030
Salix purpurea
SapurV1A.1507s0030
N
0.000
SapurV1A.3839s0010
Salix purpurea
SapurV1A.3839s0010
N
0.000
SapurV1A.5427s0010
Salix purpurea
SapurV1A.5427s0010
N
0.000
Sb01g028260
Sorghum bicolor
Sb01g028260
N
0.000
Sb04g031230
Sorghum bicolor
Sb04g031230
N
0.000
Sb06g027000
Sorghum bicolor
Sb06g027000
N
0.000
Sb07g024020
Sorghum bicolor
Sb07g024020
N
0.000
Sb08g005380
Sorghum bicolor
Sb08g005380
N
0.000
scaffold_102351.1
Arabidopsis lyrata
scaffold_102351.1
N
0.000
SELMODRAFT_69064
Selaginella moellendorffii
SELMODRAFT_69064
N
0.000
SELMODRAFT_69065
Selaginella moellendorffii
SELMODRAFT_69065
N
0.000
Si010911m.g
Setaria italica
Si010911m.g
N
0.000
Si017318m.g
Setaria italica
Si017318m.g
N
0.000
Solyc10g085800.1
Solanum lycopersicum
Solyc10g085800.1
N
0.000
TCM_015701
Theobroma cacao
TCM_015701
N
0.000
TCM_022356
Theobroma cacao
TCM_022356
N
0.000
TCM_034802
Theobroma cacao
TCM_034802
N
0.000
TCM_041560
Theobroma cacao
TCM_041560
N
0.000
Thhalv10008598m.g
Eutrema salsugineum
Thhalv10008598m.g
N
0.000
Thhalv10008750m.g
Eutrema salsugineum
Thhalv10008750m.g
N
0.000
Thhalv10017279m.g
Eutrema salsugineum
Thhalv10017279m.g
N
0.000
Thhalv10019067m.g
Eutrema salsugineum
Thhalv10019067m.g
N
0.000
TRAES3BF035900070CFD_g
Triticum aestivum
TRAES3BF035900070CFD_g
N
0.000
TRAES3BF035900140CFD_g
Triticum aestivum
TRAES3BF035900140CFD_g
N
0.000
TRAES3BF035900190CFD_g
Triticum aestivum
TRAES3BF035900190CFD_g
N
0.000
Traes_1AL_791D3B325
Triticum aestivum
Traes_1AL_791D3B325
N
0.000
Traes_1BL_C202F3DE1
Triticum aestivum
Traes_1BL_C202F3DE1
N
0.000
Traes_2AL_74EFA5757
Triticum aestivum
Traes_2AL_74EFA5757
N
0.000
Traes_2BL_69847FCA6
Triticum aestivum
Traes_2BL_69847FCA6
N
0.000
Traes_3AL_970EF6E45
Triticum aestivum
Traes_3AL_970EF6E45
N
0.000
Traes_3AL_CF608F443
Triticum aestivum
Traes_3AL_CF608F443
N
0.000
Traes_3DL_6A5CA5C37
Triticum aestivum
Traes_3DL_6A5CA5C37
N
0.000
Traes_3DL_96F825D26
Triticum aestivum
Traes_3DL_96F825D26
N
0.000
Traes_6DL_CF3557CFC
Triticum aestivum
Traes_6DL_CF3557CFC
N
0.000
Traes_7AS_9EA289C71
Triticum aestivum
Traes_7AS_9EA289C71
N
0.000
Traes_7DS_620E0D488
Triticum aestivum
Traes_7DS_620E0D488
N
0.000
TRIUR3_09966
Triticum urartu
TRIUR3_09966
N
0.000
TRIUR3_25489
Triticum urartu
TRIUR3_25489
N
0.000
TRIUR3_27842
Triticum urartu
TRIUR3_27842
N
0.000
TRIUR3_30366
Triticum urartu
TRIUR3_30366
N
0.000
TRIUR3_34039
Triticum urartu
TRIUR3_34039
N
0.000
VIT_02s0012g01400
Vitis vinifera
VIT_02s0012g01400
N
0.000
VIT_08s0007g04560
Vitis vinifera
VIT_08s0007g04560
N
0.000
VIT_18s0122g00320
Vitis vinifera
VIT_18s0122g00320
N
0.000
XM_002306973.1
Populus trichocarpa
POPTR_0005s28040
N
0.000